RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 KANK2Q63ZY3 851 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 TMEM132EQ6IEE7 984 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 C14orf80Q86SX3 495 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 SLC41A1Q8IVJ1 513 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 TPH2Q8IWU9 490 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 MYO1HQ8N1T3 1032 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 STPG3Q8N7X2 389 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 BTBD2Q9BX70 525 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 WNT8AQ9H1J5 351 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 DPP7Q9UHL4 492 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 DENND2AQ9ULE3 1009 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 NUMBLQ9Y6R0 609 aa6.11□□□□□ -1.43
PRPF39-212ENST00000557477 MYPNQ86TC9 1320 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 N4BP3O15049 544 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 OPHN1O60890 802 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 SEMA7AO75326 666 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 RFPL1O75677 317 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 C5AR1P21730 350 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 APEX1P27695 318 aaKnown RBP6.1□□□□□ -1.43
PRPF39-212ENST00000557477 LGALS4P56470 323 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 MRPS9P82933 396 aaKnown RBP6.1□□□□□ -1.43
PRPF39-212ENST00000557477 FOXO4P98177 505 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 CD83Q01151 205 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 PPARAQ07869 468 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 TCIRG1Q13488 830 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 STILQ15468 1287 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 EFCAB2Q5VUJ9 269 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 NXNQ6DKJ4 435 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 TCEAL8Q8IYN2 117 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 TSPEARQ8WU66 669 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 RPGRQ92834 1020 aaKnown RBP6.1□□□□□ -1.43
PRPF39-212ENST00000557477 RAX2Q96IS3 184 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 C8orf48Q96LL4 319 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 C11orf84Q9BUA3 381 aaPredicted RBP6.1□□□□□ -1.43
PRPF39-212ENST00000557477 PITHD1Q9GZP4 211 aaPredicted RBP6.1□□□□□ -1.43
PRPF39-212ENST00000557477 KCND1Q9NSA2 647 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 TUBD1Q9UJT1 453 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 GIT1Q9Y2X7 761 aa6.1□□□□□ -1.43
PRPF39-212ENST00000557477 ATF3P18847 181 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 BCAR1P56945 870 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 CCT2P78371 535 aaKnown RBP6.09□□□□□ -1.43
PRPF39-212ENST00000557477 SMAD4Q13485 552 aaKnown RBP6.09□□□□□ -1.43
PRPF39-212ENST00000557477 MLC1Q15049 377 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 MUM1Q2TAK8 710 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 MAGEB6Q8N7X4 407 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 OR5AN1Q8NGI8 311 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 AUTS2Q8WXX7 1259 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 HSPBAP1Q96EW2 488 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 CLIC6Q96NY7 704 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 PRSS50Q9UI38 385 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 CROTQ9UKG9 612 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 ZBTB21Q9ULJ3 1066 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 USP18Q9UMW8 372 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 ANKRD6Q9Y2G4 727 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 NESP48681 1621 aa6.09□□□□□ -1.43
PRPF39-212ENST00000557477 A0A0A6YYJ9 748 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 IL33O95760 270 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
PRPF39-212ENST00000557477 MTHFD2P13995 350 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 ADCY8P40145 1251 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 TBX4P57082 545 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 DLG4P78352 724 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 CDK17Q00537 523 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 NFATC3Q12968 1075 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 LINC00482Q8N8I6 264 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 KYQ8NBH2 561 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 FBXO15Q8NCQ5 510 aaPredicted RBP6.08□□□□□ -1.44
PRPF39-212ENST00000557477 WDR48Q8TAF3 677 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 TTC8Q8TAM2 541 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 ZBTB8AQ96BR9 441 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 IFT122Q9HBG6 1241 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 PCDH18Q9HCL0 1135 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 KCMF1Q9P0J7 381 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 GABBR1Q9UBS5 961 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 FTSJ1Q9UET6 329 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 EVLQ9UI08 416 aaPredicted RBP6.08□□□□□ -1.44
PRPF39-212ENST00000557477 MAGEL2Q9UJ55 1249 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 PCDHB6Q9Y5E3 794 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 CDY2AQ9Y6F7 541 aa6.08□□□□□ -1.44
PRPF39-212ENST00000557477 BAZ1BQ9UIG0 1483 aaKnown RBP6.08□□□□□ -1.44
PRPF39-212ENST00000557477 NDUFS2O75306 463 aa6.07□□□□□ -1.44
PRPF39-212ENST00000557477 COL6A1P12109 1028 aa6.07□□□□□ -1.44
PRPF39-212ENST00000557477 SPIDRQ14159 915 aa6.07□□□□□ -1.44
PRPF39-212ENST00000557477 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
PRPF39-212ENST00000557477 MBNL2Q5VZF2 373 aaKnown RBP6.07□□□□□ -1.44
PRPF39-212ENST00000557477 CXorf57Q6NSI4 855 aaKnown RBP6.07□□□□□ -1.44
PRPF39-212ENST00000557477 GAREM2Q75VX8 874 aa6.07□□□□□ -1.44
PRPF39-212ENST00000557477 TMEFF1Q8IYR6 380 aa6.07□□□□□ -1.44
PRPF39-212ENST00000557477 PPM1NQ8N819 430 aa6.07□□□□□ -1.44
PRPF39-212ENST00000557477 OR14C36Q8NHC7 312 aa6.07□□□□□ -1.44
PRPF39-212ENST00000557477 NOL10Q9BSC4 688 aaKnown RBP6.07□□□□□ -1.44
PRPF39-212ENST00000557477 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.07□□□□□ -1.44
PRPF39-212ENST00000557477 SERPINB13Q9UIV8 391 aa6.07□□□□□ -1.44
PRPF39-212ENST00000557477 PNMA8BQ9ULN7 279 aaPredicted RBP6.07□□□□□ -1.44
PRPF39-212ENST00000557477 NCAPD3P42695 1498 aa6.07□□□□□ -1.44
PRPF39-212ENST00000557477 HMGXB3Q12766 1538 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 MAFO75444 373 aaPredicted RBP6.06□□□□□ -1.44
PRPF39-212ENST00000557477 KNG1P01042 644 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 SLC5A3P53794 718 aa6.06□□□□□ -1.44
PRPF39-212ENST00000557477 MLLT6P55198 1093 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms