RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 BUB1BO60566 1050 aaPredicted RBP19.29■□□□□ 0.68
XRCC3-218ENST00000557439 CYP3A4P08684 503 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 HSPA1LP34931 641 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 DLG4P78352 724 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 NT5DC3Q86UY8 548 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 HOOK2Q96ED9 719 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 GPR88Q9GZN0 384 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 TAF1DQ9H5J8 278 aaPredicted RBP19.29■□□□□ 0.68
XRCC3-218ENST00000557439 BRWD3Q6RI45 1802 aa19.29■□□□□ 0.68
XRCC3-218ENST00000557439 KIF13BQ9NQT8 1826 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 BTNL10A8MVZ5 291 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 PGRMC1O00264 195 aaKnown RBP19.28■□□□□ 0.68
XRCC3-218ENST00000557439 TTI1O43156 1089 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 DAPK3O43293 454 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 SLC26A4O43511 780 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 HPDP32754 393 aaPredicted RBP19.28■□□□□ 0.68
XRCC3-218ENST00000557439 STAT1P42224 750 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 ZNF211Q13398 564 aaPredicted RBP19.28■□□□□ 0.68
XRCC3-218ENST00000557439 PRPF4BQ13523 1007 aaKnown RBP19.28■□□□□ 0.68
XRCC3-218ENST00000557439 UAP1Q16222 522 aaPredicted RBP19.28■□□□□ 0.68
XRCC3-218ENST00000557439 ZNF720Q7Z2F6 126 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 DPH5Q9H2P9 285 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 AGPAT3Q9NRZ7 376 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 SHTN1A0MZ66 631 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 TMEM150BA6NC51 233 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 SOX5P35711 763 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 AADACL2Q6P093 401 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 SLC35G2Q8TBE7 412 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 ZNF577Q9BSK1 485 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 STXBP5LQ9Y2K9 1186 aa19.28■□□□□ 0.68
XRCC3-218ENST00000557439 PRELPP51888 382 aa19.27■□□□□ 0.68
XRCC3-218ENST00000557439 CORO7P57737 925 aa19.27■□□□□ 0.68
XRCC3-218ENST00000557439 C10orf76Q5T2E6 689 aa19.27■□□□□ 0.68
XRCC3-218ENST00000557439 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.27■□□□□ 0.687e-7■■■■■ 30.2
XRCC3-218ENST00000557439 TRIM51Q9BSJ1 452 aa19.27■□□□□ 0.68
XRCC3-218ENST00000557439 ZBTB21Q9ULJ3 1066 aa19.27■□□□□ 0.68
XRCC3-218ENST00000557439 GCOM1H8Y6P7 765 aaPredicted RBP19.27■□□□□ 0.67
XRCC3-218ENST00000557439 PIK3CDO00329 1044 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 POLR2MP0CAP2 368 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 HSD17B3P37058 310 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 DCAF12L1Q5VU92 463 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 VPS36Q86VN1 386 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 ACTRT1Q8TDG2 376 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 SLC20A1Q8WUM9 679 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 SLC5A5Q92911 643 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 ELMO3Q96BJ8 720 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 PBKQ96KB5 322 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 LXNQ9BS40 222 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 ISCUQ9H1K1 167 aa19.27■□□□□ 0.67
XRCC3-218ENST00000557439 MYH11P35749 1972 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 GAP43P17677 238 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 SEC24CP53992 1094 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 PHLDB3Q6NSJ2 640 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 DAW1Q8N136 415 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 SLC30A5Q8TAD4 765 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 AKT1S1Q96B36 256 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 INTS2Q9H0H0 1204 aaKnown RBP19.26■□□□□ 0.67
XRCC3-218ENST00000557439 THAP2Q9H0W7 228 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 HIP1RO75146 1068 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 FGGP02679 453 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 FERP16591 822 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 CEP55Q53EZ4 464 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 SYCP3Q8IZU3 236 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 TUFT1Q9NNX1 390 aa19.26■□□□□ 0.67
XRCC3-218ENST00000557439 EXOC3O60645 756 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 HDLBPQ00341 1268 aaKnown RBP19.25■□□□□ 0.67
XRCC3-218ENST00000557439 PPP2R5CQ13362 524 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 IFI16Q16666 785 aaKnown RBP19.25■□□□□ 0.67
XRCC3-218ENST00000557439 ZNF746Q6NUN9 644 aaPredicted RBP19.25■□□□□ 0.67
XRCC3-218ENST00000557439 SLFN11Q7Z7L1 901 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 PACS2Q86VP3 889 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 WHAMMQ8TF30 809 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 MRIQ9BWK5 157 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 FAM107BQ9H098 131 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 ACP6Q9NPH0 428 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 ZBTB12Q9Y330 459 aaPredicted RBP19.25■□□□□ 0.67
XRCC3-218ENST00000557439 H0YIN7 160 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 FOXN3O00409 490 aaPredicted RBP19.25■□□□□ 0.67
XRCC3-218ENST00000557439 EIF3DO15371 548 aaKnown RBP eCLIP19.25■□□□□ 0.67
XRCC3-218ENST00000557439 RAD17O75943 681 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 NR1D1P20393 614 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 SKOR1P84550 965 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 DGKZQ13574 1117 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 GRIPAP1Q4V328 841 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 CC2D2BQ6DHV5 1058 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 HS2ST1Q7LGA3 356 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 MREGQ8N565 214 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 IL31RAQ8NI17 732 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 AGBL1Q96MI9 1066 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 TMOD4Q9NZQ9 345 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 BCCIPQ9P287 314 aaKnown RBP eCLIP19.25■□□□□ 0.67
XRCC3-218ENST00000557439 COG5Q9UP83 839 aa19.25■□□□□ 0.67
XRCC3-218ENST00000557439 FRMPD4Q14CM0 1322 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 ATRNL1Q5VV63 1379 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 RBBP6Q7Z6E9 1792 aaKnown RBP19.24■□□□□ 0.67
XRCC3-218ENST00000557439 APBA3O96018 575 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 HSPA9P38646 679 aaKnown RBP19.24■□□□□ 0.67
XRCC3-218ENST00000557439 LIG3P49916 1009 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 MYL7Q01449 175 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 UBLCP1Q8WVY7 318 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms