RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 PRMT1Q99873 361 aaKnown RBP11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 MMRN2Q9H8L6 949 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 RNPEPL1Q9HAU8 725 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 HOXC10Q9NYD6 342 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 PNPLA7Q6ZV29 1317 aa11.33□□□□□ -0.59
SUPT16H-207ENST00000557394 RTL9Q8NET4 1388 aa11.33□□□□□ -0.59
SUPT16H-207ENST00000557394 PGRMC1O00264 195 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 KCNK3O14649 394 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 TLR2O60603 784 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 AGTP01019 485 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 SHBGP04278 402 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 PCCAP05165 728 aaPredicted RBP11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 PYGBP11216 843 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 CALB2P22676 271 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 SP100P23497 879 aaPredicted RBP11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 GBP1P32455 592 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 SLC9C1Q4G0N8 1177 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 CENPPQ6IPU0 288 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 NLGN1Q8N2Q7 840 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 RASGEF1CQ8N431 466 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 DHX38Q92620 1227 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 TRAPPC9Q96Q05 1148 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 SELENOSQ9BQE4 189 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.33□□□□□ -0.61e-15■■■□□ 14.7
SUPT16H-207ENST00000557394 CENPOQ9BU64 300 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 CCSER1Q9C0I3 900 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 MAGEF1Q9HAY2 307 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 SPC25Q9HBM1 224 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 NKX1-2Q9UD57 310 aaPredicted RBP11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 NUP188Q5SRE5 1749 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 MYH1P12882 1939 aa11.33□□□□□ -0.6
SUPT16H-207ENST00000557394 CCDC169A6NNP5 214 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 SUN1O94901 812 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 HOXD10P28358 340 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 MCM7P33993 719 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 DYNC1I2Q13409 638 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 SLC18A3Q16572 532 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 OR52E8Q6IFG1 317 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 NDUFAF2Q8N183 169 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 MARCH10Q8NA82 808 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 ATP8B4Q8TF62 1192 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 TMEM109Q9BVC6 243 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 TRIM4Q9C037 500 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 DHX36Q9H2U1 1008 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 CUEDC2Q9H467 287 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 RXFP1Q9HBX9 757 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 PRKAG3Q9UGI9 489 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 STK38LQ9Y2H1 464 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 SLC4A4Q9Y6R1 1079 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 RIC1Q4ADV7 1423 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 ZNF16P17020 682 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 GNAQP50148 359 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 PEX5P50542 639 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 KLC1Q07866 573 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 STK4Q13043 487 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 CNGA2Q16280 664 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 PARP6Q2NL67 630 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 TRIM68Q6AZZ1 485 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 FAAH2Q6GMR7 532 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 ALKBH2Q6NS38 261 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 MYOCDQ8IZQ8 938 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 ENDOVQ8N8Q3 282 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 LRRC15Q8TF66 581 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 UTP4Q969X6 686 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 RAB3IPQ96QF0 476 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 PDGFDQ9GZP0 370 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 DDX47Q9H0S4 455 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 PCMTD2Q9NV79 361 aa11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 TMA7Q9Y2S6 64 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 NOC2LQ9Y3T9 749 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-207ENST00000557394 A0A1B0GVG6 124 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 GSG1L2A8MUP6 293 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 CEP104O60308 925 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 PEX11AO75192 247 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 TPBGLP0DKB5 382 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 GJA8P48165 433 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 TDRD12Q587J7 1177 aaKnown RBP11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 PIK3AP1Q6ZUJ8 805 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 CROCCP2Q86T23 111 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 LRRC57Q8N9N7 239 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 FBF1Q8TES7 1133 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 STK32AQ8WU08 396 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 KIFAP3Q92845 792 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 FAM136AQ96C01 138 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 RMDN2Q96LZ7 410 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 PLEKHG4BQ96PX9 1271 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 FMO2Q99518 471 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 AP1M1Q9BXS5 423 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 PABPC3Q9H361 631 aaKnown RBP11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 TMOD3Q9NYL9 352 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 TCEAL9Q9UHQ7 104 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 ARL2BPQ9Y2Y0 163 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 IKBKGQ9Y6K9 419 aa11.31□□□□□ -0.6
SUPT16H-207ENST00000557394 EIF4E1BA6NMX2 242 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms