RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 OSMRQ99650 979 aa12.66□□□□□ -0.38
HNRNPC-231ENST00000557336 CWH43Q9H720 699 aa12.66□□□□□ -0.38
HNRNPC-231ENST00000557336 NCOA5Q9HCD5 579 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-231ENST00000557336 C6orf50Q9HD87 102 aa12.66□□□□□ -0.38
HNRNPC-231ENST00000557336 TBC1D22BQ9NU19 505 aa12.66□□□□□ -0.38
HNRNPC-231ENST00000557336 NAP1L2Q9ULW6 460 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-231ENST00000557336 PCDHA10Q9Y5I2 948 aa12.66□□□□□ -0.38
HNRNPC-231ENST00000557336 EVPLQ92817 2033 aa12.66□□□□□ -0.38
HNRNPC-231ENST00000557336 TECTAO75443 2155 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 CCDC196A0A1B0GTZ2 297 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 MSH4O15457 936 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 STBD1O95210 358 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 FGFR1P11362 822 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 ALADP13716 330 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 IFNAR1P17181 557 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 PDIA3P30101 505 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 NRIP1P48552 1158 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 CLCN3P51790 818 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 ERVFC1P60507 584 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 SMAD4Q13485 552 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 BLOC1S2Q6QNY1 142 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 LRRC55Q6ZSA7 311 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 TRMT1LQ7Z2T5 733 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 CEP89Q96ST8 783 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 TYW1Q9NV66 732 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 VPS54Q9P1Q0 977 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 GABBR1Q9UBS5 961 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 CD207Q9UJ71 328 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 PCDHB7Q9Y5E2 793 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 ZNF318Q5VUA4 2279 aa12.65□□□□□ -0.38
HNRNPC-231ENST00000557336 PLXNA4Q9HCM2 1894 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 TBKBP1A7MCY6 615 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 GPR182O15218 404 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 IBSPP21815 317 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 SETQ01105 290 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 COASYQ13057 564 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 KCNC3Q14003 757 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 TOB2Q14106 344 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 NPY5RQ15761 445 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 MCTP2Q6DN12 878 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 B3GNT9Q6UX72 402 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 FAM43BQ6ZT52 329 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 RBM23Q86U06 439 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 CKAP2LQ8IYA6 745 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 SMAP1Q8IYB5 467 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 LRRC71Q8N4P6 559 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 METTL13Q8N6R0 699 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 SMRP1Q8NCR6 262 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 SLC5A5Q92911 643 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 C1orf112Q9NSG2 853 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 TMEM161AQ9NX61 479 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 LRFN2Q9ULH4 789 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 FAM50BQ9Y247 325 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 HCN4Q9Y3Q4 1203 aa12.64□□□□□ -0.39
HNRNPC-231ENST00000557336 FNDC1Q4ZHG4 1894 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 ZDBF2Q9HCK1 2354 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 DENND3A2RUS2 1198 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 M0R2N6 131 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 FSCN2O14926 492 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 PER2O15055 1255 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 FGF18O76093 207 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 PSAPP07602 524 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 GNA11P29992 359 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 NLRP11P59045 1033 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 CCT2P78371 535 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 FGD1P98174 961 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 DRP2Q13474 957 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 TARBP2Q15633 366 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 HERC4Q5GLZ8 1057 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 EFCAB12Q6NXP0 572 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 RNF135Q8IUD6 432 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 COLGALT1Q8NBJ5 622 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 CCDC136Q96JN2 1154 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 ZNF668Q96K58 619 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 CASD1Q96PB1 797 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 SLC26A6Q9BXS9 759 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 ELAC1Q9H777 363 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 DISC1Q9NRI5 854 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 MUTYHQ9UIF7 546 aa12.63□□□□□ -0.39
HNRNPC-231ENST00000557336 USP34Q70CQ2 3546 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 WDR64B1ANS9 1081 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 LOC730098B7Z3J9 87 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 MAGEB2O15479 319 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 PSMD10O75832 226 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 OATP04181 439 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 ATF7P17544 494 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 NDUFV1P49821 464 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 GPC3P51654 580 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 USP11P51784 963 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 UBE3AQ05086 875 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 CBX2Q14781 532 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 HFE2Q6ZVN8 426 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 ZNF598Q86UK7 904 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 CCDC12Q8WUD4 166 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 RIT2Q99578 217 aa12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 USP15Q9Y4E8 981 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-231ENST00000557336 CYP3A7-CYP3A51PA0A087WV96 503 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms