RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 GKAP1Q5VSY0 366 aaPredicted RBP12.36□□□□□ -0.43
SRP54-213ENST00000556994 CYB5D1Q6P9G0 228 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 C15orf52Q6ZUT6 534 aaKnown RBP12.36□□□□□ -0.43
SRP54-213ENST00000556994 FAM228AQ86W67 206 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 SLC30A5Q8TAD4 765 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 SCLT1Q96NL6 688 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 THAP2Q9H0W7 228 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 USP40Q9NVE5 1235 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 DNAJC12Q9UKB3 198 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 C5orf60A6NFR6 353 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 PAEPP09466 180 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 CHN1P15882 459 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 RPL13P26373 211 aaKnown RBP12.36□□□□□ -0.43
SRP54-213ENST00000556994 SOX5P35711 763 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 DRP2Q13474 957 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 PLS1Q14651 629 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 ZFPM1Q8IX07 1006 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 TBC1D16Q8TBP0 767 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 CTNNBL1Q8WYA6 563 aaPredicted RBP12.36□□□□□ -0.43
SRP54-213ENST00000556994 XPO6Q96QU8 1125 aaKnown RBP12.36□□□□□ -0.43
SRP54-213ENST00000556994 ERP44Q9BS26 406 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 EPB41L4BQ9H329 900 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 ACTR5Q9H9F9 607 aaPredicted RBP12.36□□□□□ -0.43
SRP54-213ENST00000556994 METTL14Q9HCE5 456 aaKnown RBP12.36□□□□□ -0.43
SRP54-213ENST00000556994 DAAM1Q9Y4D1 1078 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 COL24A1Q17RW2 1714 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 MYO3BQ8WXR4 1341 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 CYP3A7-CYP3A51PA0A087WV96 503 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 EML1O00423 815 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 LRRN2O75325 713 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 TBCAO75347 108 aaKnown RBP12.35□□□□□ -0.43
SRP54-213ENST00000556994 TRIM49P0CI25 452 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 TRIM49CP0CI26 452 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 KRT13P13646 458 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 CYP3A7P24462 503 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 HOXA13P31271 388 aaPredicted RBP12.35□□□□□ -0.43
SRP54-213ENST00000556994 NPEPPSP55786 919 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 PTENP60484 403 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 IFI35P80217 286 aaPredicted RBP12.35□□□□□ -0.43
SRP54-213ENST00000556994 PPATQ06203 517 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 CBWD6Q4V339 395 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 CBWD3Q5JTY5 395 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 CBWD5Q5RIA9 395 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 ERMARDQ5T6L9 678 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 DUPD1Q68J44 220 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 PRR5LQ6MZQ0 368 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 BARGINQ6ZT62 677 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 RDH13Q8NBN7 331 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 ERMNQ8TAM6 284 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 FBXO25Q8TCJ0 367 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 RFFLQ8WZ73 363 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 ALG3Q92685 438 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 LENG9Q96B70 501 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
SRP54-213ENST00000556994 TLCD1Q96CP7 247 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 HVCN1Q96D96 273 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 C18orf8Q96DM3 657 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 CHMP6Q96FZ7 201 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 NAP1L4Q99733 375 aaKnown RBP12.35□□□□□ -0.43
SRP54-213ENST00000556994 MTFR1LQ9H019 292 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 ZDHHC18Q9NUE0 388 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 COG5Q9UP83 839 aa12.35□□□□□ -0.43
SRP54-213ENST00000556994 LTBP4Q8N2S1 1624 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 TMEM110-MUSTN1A8MSY1 372 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 TULP1O00294 542 aaPredicted RBP12.34□□□□□ -0.43
SRP54-213ENST00000556994 RGL2O15211 777 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 SLCO1A2P46721 670 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 CYP2J2P51589 502 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 PMS2P54278 862 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 CTTNQ14247 550 aaKnown RBP12.34□□□□□ -0.43
SRP54-213ENST00000556994 SLC29A2Q14542 456 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 MYCT1Q8N699 235 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 C3orf20Q8ND61 904 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 TBC1D22AQ8WUA7 517 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 CCT6BQ92526 530 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 BORCS6Q96GS4 357 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 TXLNGYQ9BZA5 131 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 RAB17Q9H0T7 212 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 AZI2Q9H6S1 392 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 INTUQ9ULD6 942 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 TPX2Q9ULW0 747 aaKnown RBP12.34□□□□□ -0.43
SRP54-213ENST00000556994 RABGAP1Q9Y3P9 1069 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 MSH4O15457 936 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 MMEP08473 750 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
SRP54-213ENST00000556994 CACNB3P54284 484 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 NFIAQ12857 509 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
SRP54-213ENST00000556994 E2F5Q15329 346 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 SNCBQ16143 134 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 TRAPPC3LQ5T215 181 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 JAMLQ86YT9 394 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 CERS5Q8N5B7 392 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 MBOAT7Q96N66 472 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 EIF2AK1Q9BQI3 630 aaKnown RBP12.34□□□□□ -0.43
SRP54-213ENST00000556994 GPR88Q9GZN0 384 aa12.34□□□□□ -0.43
SRP54-213ENST00000556994 SEMA4AQ9H3S1 761 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms