RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 CLSTN2Q9H4D0 955 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 SUGCTQ9HAC7 445 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 KCNG1Q9UIX4 513 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 NOD1Q9Y239 953 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 HTTP42858 3142 aa10.79□□□□□ -0.68
TMEM260-213ENST00000556929 IGKV6-21A0A0C4DH24 114 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 SMIM35A0A1B0GVV1 85 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 PVALEFA0A1B0GWK0 134 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 TLR3O15455 904 aaKnown RBP10.78□□□□□ -0.68
TMEM260-213ENST00000556929 ASAP2O43150 1006 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 TBCAO75347 108 aaKnown RBP10.78□□□□□ -0.68
TMEM260-213ENST00000556929 FAM13AO94988 1023 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 IDEP14735 1019 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 HOXC8P31273 242 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 ADAM17P78536 824 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 RAD51AP2Q09MP3 1159 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 PNOCQ13519 176 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 PTGISQ16647 500 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 ARSHQ5FYA8 562 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 GDF6Q6KF10 455 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-213ENST00000556929 TAF2Q6P1X5 1199 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 CNNM4Q6P4Q7 775 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 SLC39A5Q6ZMH5 540 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 UNC13DQ70J99 1090 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 GRAMD1CQ8IYS0 662 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 METTL13Q8N6R0 699 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 PPP1R13LQ8WUF5 828 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 SMARCE1Q969G3 411 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 PAWRQ96IZ0 340 aaKnown RBP10.78□□□□□ -0.68
TMEM260-213ENST00000556929 IFT74Q96LB3 600 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 MAP7D2Q96T17 732 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 REEP2Q9BRK0 252 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 ZHX3Q9H4I2 956 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 C17orf75Q9HAS0 396 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 PDLIM7Q9NR12 457 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 RMND1Q9NWS8 449 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 PCDHA2Q9Y5H9 948 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 GRIN2DO15399 1336 aa10.78□□□□□ -0.68
TMEM260-213ENST00000556929 NPHP3-ACAD11A0A0J9YXS1 232 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 MBLAC1A4D2B0 266 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-213ENST00000556929 TREHO43280 583 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 HIP1RO75146 1068 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 LETM1O95202 739 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-213ENST00000556929 RPN1P04843 607 aaKnown RBP10.77□□□□□ -0.69
TMEM260-213ENST00000556929 CHRM1P11229 460 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-213ENST00000556929 COL6A1P12109 1028 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 GAP43P17677 238 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 CASP1P29466 404 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 CDK7P50613 346 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 RTP1P59025 263 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 CDC42EP1Q00587 391 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 MDM2Q00987 491 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-213ENST00000556929 DPYDQ12882 1025 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 MXD4Q14582 209 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-213ENST00000556929 PPP2R5AQ15172 486 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 MARCH8Q5T0T0 291 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 C1orf53Q5VUE5 145 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 CAVIN1Q6NZI2 390 aaKnown RBP10.77□□□□□ -0.69
TMEM260-213ENST00000556929 RSPH3Q86UC2 560 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 NME8Q8N427 588 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 PSPC1Q8WXF1 523 aaKnown RBP10.77□□□□□ -0.69
TMEM260-213ENST00000556929 DNAJC19Q96DA6 116 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 ABHD8Q96I13 439 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 GSDMAQ96QA5 445 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 POLR3FQ9H1D9 316 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-213ENST00000556929 PARVGQ9HBI0 331 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 XPNPEP1Q9NQW7 623 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 PANK4Q9NVE7 773 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 LARSQ9P2J5 1176 aaKnown RBP10.77□□□□□ -0.69
TMEM260-213ENST00000556929 AKT3Q9Y243 479 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 COL4A3BPQ9Y5P4 624 aa10.77□□□□□ -0.69
TMEM260-213ENST00000556929 FRMD3A2A2Y4 597 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 EN2P19622 333 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-213ENST00000556929 ARL2P36404 184 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 CLCN3P51790 818 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 SMTNP53814 917 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 ZNF200P98182 395 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-213ENST00000556929 PSMD2Q13200 908 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 PTK7Q13308 1070 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 TFDP1Q14186 410 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 KCNB1Q14721 858 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 HERC4Q5GLZ8 1057 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-213ENST00000556929 ZNF710Q8N1W2 664 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 LRRC71Q8N4P6 559 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 MYCT1Q8N699 235 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 CCDC155Q8N6L0 562 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 SLC17A8Q8NDX2 589 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 DIS3LQ8TF46 1054 aaKnown RBP10.76□□□□□ -0.69
TMEM260-213ENST00000556929 TMEM143Q96AN5 459 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 GTPBP4Q9BZE4 634 aaKnown RBP10.76□□□□□ -0.69
TMEM260-213ENST00000556929 EXOC1Q9NV70 894 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 TMEM63CQ9P1W3 806 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 KIAA1468Q9P260 1216 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 SUCLA2Q9P2R7 463 aaPredicted RBP10.76□□□□□ -0.69
TMEM260-213ENST00000556929 SEL1LQ9UBV2 794 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 PCDHA5Q9Y5H7 936 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 CENPFP49454 3210 aa10.76□□□□□ -0.69
TMEM260-213ENST00000556929 SIP14410 1827 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 SFI1A8K8P3 1242 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 DCDC2CA8MYV0 355 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms