RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 FAM117BQ6P1L5 589 aa25.51■■□□□ 1.67
TDP1-216ENST00000556867 RTN4RL1Q86UN2 441 aaPredicted RBP25.51■■□□□ 1.67
TDP1-216ENST00000556867 ZNF410Q86VK4 478 aa25.51■■□□□ 1.67
TDP1-216ENST00000556867 NLRP7Q8WX94 980 aa25.51■■□□□ 1.67
TDP1-216ENST00000556867 SCLT1Q96NL6 688 aa25.51■■□□□ 1.67
TDP1-216ENST00000556867 CDX2Q99626 313 aaPredicted RBP25.51■■□□□ 1.67
TDP1-216ENST00000556867 LRWD1Q9UFC0 647 aa25.51■■□□□ 1.67
TDP1-216ENST00000556867 STK24Q9Y6E0 443 aa25.51■■□□□ 1.67
TDP1-216ENST00000556867 COL4A6Q14031 1691 aa25.51■■□□□ 1.67
TDP1-216ENST00000556867 LCHNA4D1U4 455 aa25.5■■□□□ 1.67
TDP1-216ENST00000556867 DARSP14868 501 aaKnown RBP25.5■■□□□ 1.67
TDP1-216ENST00000556867 IL17AQ16552 155 aa25.5■■□□□ 1.67
TDP1-216ENST00000556867 DTHD1Q6ZMT9 781 aa25.5■■□□□ 1.67
TDP1-216ENST00000556867 FERMT3Q86UX7 667 aa25.5■■□□□ 1.67
TDP1-216ENST00000556867 PIGOQ8TEQ8 1089 aa25.5■■□□□ 1.67
TDP1-216ENST00000556867 ZNF668Q96K58 619 aaPredicted RBP25.5■■□□□ 1.67
TDP1-216ENST00000556867 CCDC43Q96MW1 224 aaKnown RBP25.5■■□□□ 1.67
TDP1-216ENST00000556867 INSL6Q9Y581 213 aa25.5■■□□□ 1.67
TDP1-216ENST00000556867 ARHGEF15O94989 841 aa25.49■■□□□ 1.67
TDP1-216ENST00000556867 TAP1Q03518 808 aa25.49■■□□□ 1.67
TDP1-216ENST00000556867 ARL6IP4Q66PJ3 421 aaKnown RBP25.49■■□□□ 1.67
TDP1-216ENST00000556867 POTEGQ6S5H5 508 aa25.49■■□□□ 1.67
TDP1-216ENST00000556867 RHPN2Q8IUC4 686 aa25.49■■□□□ 1.67
TDP1-216ENST00000556867 TCP11Q8WWU5 503 aa25.49■■□□□ 1.67
TDP1-216ENST00000556867 PSPC1Q8WXF1 523 aaKnown RBP25.49■■□□□ 1.67
TDP1-216ENST00000556867 NACC1Q96RE7 527 aa25.49■■□□□ 1.67
TDP1-216ENST00000556867 MTRQ99707 1265 aa25.49■■□□□ 1.67
TDP1-216ENST00000556867 XPNPEP1Q9NQW7 623 aa25.49■■□□□ 1.67
TDP1-216ENST00000556867 BMP2KQ9NSY1 1161 aaPredicted RBP25.49■■□□□ 1.67
TDP1-216ENST00000556867 DBR1Q9UK59 544 aaKnown RBP25.49■■□□□ 1.67
TDP1-216ENST00000556867 STXBP5LQ9Y2K9 1186 aa25.49■■□□□ 1.67
TDP1-216ENST00000556867 DGAT1O75907 488 aa25.48■■□□□ 1.67
TDP1-216ENST00000556867 CCT6AP40227 531 aaKnown RBP25.48■■□□□ 1.67
TDP1-216ENST00000556867 RESTQ13127 1097 aa25.48■■□□□ 1.67
TDP1-216ENST00000556867 SP7Q8TDD2 431 aaPredicted RBP25.48■■□□□ 1.67
TDP1-216ENST00000556867 TMEM143Q96AN5 459 aa25.48■■□□□ 1.67
TDP1-216ENST00000556867 GCOM2Q9BZD3 368 aaPredicted RBP25.48■■□□□ 1.67
TDP1-216ENST00000556867 ATP6V0A4Q9HBG4 840 aa25.48■■□□□ 1.67
TDP1-216ENST00000556867 MTMR6Q9Y217 621 aa25.48■■□□□ 1.67
TDP1-216ENST00000556867 COL4A3BPQ9Y5P4 624 aa25.48■■□□□ 1.67
TDP1-216ENST00000556867 A0A087WZ62 844 aa25.47■■□□□ 1.67
TDP1-216ENST00000556867 MGEA5O60502 916 aa25.47■■□□□ 1.67
TDP1-216ENST00000556867 UPP2O95045 317 aa25.47■■□□□ 1.67
TDP1-216ENST00000556867 BMP15O95972 392 aa25.47■■□□□ 1.67
TDP1-216ENST00000556867 SNX29Q8TEQ0 813 aa25.47■■□□□ 1.67
TDP1-216ENST00000556867 YME1L1Q96TA2 773 aa25.47■■□□□ 1.67
TDP1-216ENST00000556867 FDXACB1Q9BRP7 624 aaPredicted RBP25.47■■□□□ 1.67
TDP1-216ENST00000556867 A0A087WWV3 80 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 STX6O43752 255 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 DSC3Q14574 896 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 NPAS4Q8IUM7 802 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 KSR1Q8IVT5 923 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 CRIPAKQ8N1N5 446 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 PRPF31Q8WWY3 499 aaKnown RBP25.46■■□□□ 1.67
TDP1-216ENST00000556867 MYLIPQ8WY64 445 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 NLRP4Q96MN2 994 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 ADAM2Q99965 735 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 PRDM12Q9H4Q4 367 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 RGS18Q9NS28 235 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 C1orf112Q9NSG2 853 aa25.46■■□□□ 1.67
TDP1-216ENST00000556867 DENND3A2RUS2 1198 aa25.45■■□□□ 1.66
TDP1-216ENST00000556867 LINC01553A4QN01 128 aa25.45■■□□□ 1.66
TDP1-216ENST00000556867 ASAP2O43150 1006 aa25.45■■□□□ 1.66
TDP1-216ENST00000556867 HSP90AA1P07900 732 aaKnown RBP25.45■■□□□ 1.66
TDP1-216ENST00000556867 LAMTOR4Q0VGL1 99 aa25.45■■□□□ 1.66
TDP1-216ENST00000556867 ECM1Q16610 540 aa25.45■■□□□ 1.66
TDP1-216ENST00000556867 KRT79Q5XKE5 535 aa25.45■■□□□ 1.66
TDP1-216ENST00000556867 INO80BQ9C086 356 aaPredicted RBP25.45■■□□□ 1.66
TDP1-216ENST00000556867 PP2D1A8MPX8 630 aa25.44■■□□□ 1.66
TDP1-216ENST00000556867 USO1O60763 962 aaKnown RBP25.44■■□□□ 1.66
TDP1-216ENST00000556867 SARSP49591 514 aaKnown RBP25.44■■□□□ 1.66
TDP1-216ENST00000556867 MXD4Q14582 209 aaPredicted RBP25.44■■□□□ 1.66
TDP1-216ENST00000556867 RC3H2Q9HBD1 1191 aaKnown RBP25.44■■□□□ 1.66
TDP1-216ENST00000556867 IFT122Q9HBG6 1241 aa25.44■■□□□ 1.66
TDP1-216ENST00000556867 VWA3AA6NCI4 1184 aa25.43■■□□□ 1.66
TDP1-216ENST00000556867 C9IYK1 514 aa25.43■■□□□ 1.66
TDP1-216ENST00000556867 STAG3L1P0CL83 205 aa25.43■■□□□ 1.66
TDP1-216ENST00000556867 SFPQP23246 707 aaKnown RBP eCLIP25.43■■□□□ 1.66
TDP1-216ENST00000556867 SF3A1Q15459 793 aaKnown RBP25.43■■□□□ 1.66
TDP1-216ENST00000556867 SLC24A5Q71RS6 500 aa25.43■■□□□ 1.66
TDP1-216ENST00000556867 MMTAG2Q9BU76 263 aaKnown RBP25.43■■□□□ 1.66
TDP1-216ENST00000556867 ZSCAN16Q9H4T2 348 aaPredicted RBP25.43■■□□□ 1.66
TDP1-216ENST00000556867 DDX19AQ9NUU7 478 aaKnown RBP25.43■■□□□ 1.66
TDP1-216ENST00000556867 KIAA1024Q9UPX6 916 aa25.43■■□□□ 1.66
TDP1-216ENST00000556867 COL6A3P12111 3177 aa25.43■■□□□ 1.66
TDP1-216ENST00000556867 ARHGEF35A5YM69 484 aa25.42■■□□□ 1.66
TDP1-216ENST00000556867 CSDE1O75534 798 aaKnown RBP25.42■■□□□ 1.66
TDP1-216ENST00000556867 DGKIO75912 1065 aa25.42■■□□□ 1.66
TDP1-216ENST00000556867 FOSL2P15408 326 aa25.42■■□□□ 1.66
TDP1-216ENST00000556867 FGFR4P22455 802 aa25.42■■□□□ 1.66
TDP1-216ENST00000556867 CDC25AP30304 524 aa25.42■■□□□ 1.66
TDP1-216ENST00000556867 ARL2P36404 184 aa25.42■■□□□ 1.66
TDP1-216ENST00000556867 ERVK-21P61565 698 aa25.42■■□□□ 1.66
TDP1-216ENST00000556867 SPRED2Q7Z698 418 aa25.42■■□□□ 1.66
TDP1-216ENST00000556867 SRGAP1Q7Z6B7 1085 aa25.42■■□□□ 1.66
TDP1-216ENST00000556867 MCPH1Q8NEM0 835 aa25.42■■□□□ 1.66
TDP1-216ENST00000556867 ZNF689Q96CS4 500 aaPredicted RBP25.42■■□□□ 1.66
TDP1-216ENST00000556867 TGS1Q96RS0 853 aaKnown RBP25.42■■□□□ 1.66
TDP1-216ENST00000556867 RNF216Q9NWF9 866 aaPredicted RBP25.42■■□□□ 1.66
TDP1-216ENST00000556867 MYH15Q9Y2K3 1946 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms