RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 MAGEC2Q9UBF1 373 aaPredicted RBP7.16□□□□□ -1.26
HIF1A-209ENST00000556827 ZNF561-AS1K7EIQ3 104 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 M0R2C6 588 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 KLHL18O94889 574 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 KNG1P01042 644 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 APPP05067 770 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 EPHB4P54760 987 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 PIK3R6Q5UE93 754 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 FSTL4Q6MZW2 842 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 Q6ZUG5 572 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 LRRTM3Q86VH5 581 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 DVL3Q92997 716 aaPredicted RBP7.15□□□□□ -1.26
HIF1A-209ENST00000556827 SSBP3Q9BWW4 388 aaPredicted RBP7.15□□□□□ -1.26
HIF1A-209ENST00000556827 CELF4Q9BZC1 486 aaKnown RBP7.15□□□□□ -1.26
HIF1A-209ENST00000556827 PDGFDQ9GZP0 370 aaPredicted RBP7.15□□□□□ -1.26
HIF1A-209ENST00000556827 RIC8BQ9NVN3 520 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 ADAM29Q9UKF5 820 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 KANK1Q14678 1352 aa7.15□□□□□ -1.26
HIF1A-209ENST00000556827 MED14O60244 1454 aa7.15□□□□□ -1.27
HIF1A-209ENST00000556827 ACOT7O00154 380 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 MAN2B1O00754 1011 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 TM4SF20Q53R12 229 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 TMEM177Q53S58 311 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 MYOM3Q5VTT5 1437 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 BTBD8Q5XKL5 378 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 CDCA2Q69YH5 1023 aaPredicted RBP7.14□□□□□ -1.27
HIF1A-209ENST00000556827 DDX53Q86TM3 631 aaKnown RBP7.14□□□□□ -1.27
HIF1A-209ENST00000556827 NLGN4XQ8N0W4 816 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 MFSD3Q96ES6 412 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 TARS2Q9BW92 718 aaKnown RBP7.14□□□□□ -1.27
HIF1A-209ENST00000556827 KRTAP3-1Q9BYR8 98 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 KCND1Q9NSA2 647 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 RRP7BPQ9NSQ0 103 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 SRPK3Q9UPE1 567 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 PLAAQ9Y263 795 aa7.14□□□□□ -1.27
HIF1A-209ENST00000556827 H0Y858 1186 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 GSTA4O15217 222 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 KPNA6O60684 536 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 MYCLP1P12525 358 aaPredicted RBP7.13□□□□□ -1.27
HIF1A-209ENST00000556827 NEK4P51957 841 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 LACTBP83111 547 aaPredicted RBP7.13□□□□□ -1.27
HIF1A-209ENST00000556827 PCBP1Q15365 356 aaKnown RBP eCLIP7.13□□□□□ -1.27
HIF1A-209ENST00000556827 CFAP100Q494V2 611 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 SLFN13Q68D06 897 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 ZNF662Q6ZS27 426 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 GPR155Q7Z3F1 870 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 IFNL2Q8IZJ0 200 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 TACO1Q9BSH4 297 aaKnown RBP7.13□□□□□ -1.27
HIF1A-209ENST00000556827 C1QTNF3Q9BXJ4 246 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 MTFR1LQ9H019 292 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 SLC39A2Q9NP94 309 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 INTS7Q9NVH2 962 aaKnown RBP7.13□□□□□ -1.27
HIF1A-209ENST00000556827 ARHGAP28Q9P2N2 729 aa7.13□□□□□ -1.27
HIF1A-209ENST00000556827 ARHGEF5Q12774 1597 aa7.12□□□□□ -1.27
HIF1A-209ENST00000556827 MED1Q15648 1581 aaPredicted RBP7.12□□□□□ -1.27
HIF1A-209ENST00000556827 LRRC9Q6ZRR7 1453 aa7.12□□□□□ -1.27
HIF1A-209ENST00000556827 VPS8Q8N3P4 1428 aa7.12□□□□□ -1.27
HIF1A-209ENST00000556827 A0A087X0B3 334 aa7.12□□□□□ -1.27
HIF1A-209ENST00000556827 TRAF5O00463 557 aa7.12□□□□□ -1.27
HIF1A-209ENST00000556827 PTPN1P18031 435 aaKnown RBP7.12□□□□□ -1.27
HIF1A-209ENST00000556827 DBPQ10586 325 aaPredicted RBP7.12□□□□□ -1.27
HIF1A-209ENST00000556827 ICAM4Q14773 271 aa7.12□□□□□ -1.27
HIF1A-209ENST00000556827 FIGNQ5HY92 759 aa7.12□□□□□ -1.27
HIF1A-209ENST00000556827 UBE2R2Q712K3 238 aaPredicted RBP7.12□□□□□ -1.27
HIF1A-209ENST00000556827 WNK4Q96J92 1243 aa7.12□□□□□ -1.27
HIF1A-209ENST00000556827 SLKQ9H2G2 1235 aaPredicted RBP7.12□□□□□ -1.27
HIF1A-209ENST00000556827 ATP23Q9Y6H3 246 aa7.12□□□□□ -1.27
HIF1A-209ENST00000556827 ABCC3O15438 1527 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 ERVK-7P63135 1459 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 SCAF11Q99590 1463 aaKnown RBP7.11□□□□□ -1.27
HIF1A-209ENST00000556827 KIF15Q9NS87 1388 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 FAM90A27PA6NNH2 459 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 B4E1Z4 1266 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 GPR42O15529 346 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 KRT37O76014 449 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 FLT3P36888 993 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 SEC23AQ15436 765 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 ZNF568Q3ZCX4 644 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 REXO1L1PQ8IX06 675 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 C2orf69Q8N8R5 385 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 PTPN18Q99952 460 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 TMPRSS5Q9H3S3 457 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 DEF6Q9H4E7 631 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 DEPDC5O75140 1603 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 VWDEQ8N2E2 1590 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 NEURL4Q96JN8 1562 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 LRRC7Q96NW7 1537 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 DUOX2Q9NRD8 1548 aa7.11□□□□□ -1.27
HIF1A-209ENST00000556827 ANKRD30AQ9BXX3 1397 aa7.1□□□□□ -1.27
HIF1A-209ENST00000556827 SBNO2Q9Y2G9 1366 aa7.1□□□□□ -1.27
HIF1A-209ENST00000556827 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.1□□□□□ -1.27
HIF1A-209ENST00000556827 C1QTNF3-AMACRE9PGA6 284 aa7.1□□□□□ -1.27
HIF1A-209ENST00000556827 SCDO00767 359 aa7.1□□□□□ -1.27
HIF1A-209ENST00000556827 PDE8AO60658 829 aa7.1□□□□□ -1.27
HIF1A-209ENST00000556827 CLSTN1O94985 981 aa7.1□□□□□ -1.27
HIF1A-209ENST00000556827 IL18BPO95998 194 aa7.1□□□□□ -1.27
HIF1A-209ENST00000556827 TNFRSF1AP19438 455 aa7.1□□□□□ -1.27
HIF1A-209ENST00000556827 CSF2RBP32927 897 aa7.1□□□□□ -1.27
HIF1A-209ENST00000556827 GJA4P35212 333 aa7.1□□□□□ -1.27
HIF1A-209ENST00000556827 MASP1P48740 699 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms