RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 NECAB2Q7Z6G3 386 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
FOXN3-212ENST00000556541 CCDC65Q8IXS2 484 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 DAW1Q8N136 415 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 TRIML1Q8N9V2 468 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 SPIRE2Q8WWL2 714 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 ST6GALNAC4Q9H4F1 302 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 C11orf49Q9H6J7 331 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 SETD4Q9NVD3 440 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 LARSQ9P2J5 1176 aaKnown RBP12.49□□□□□ -0.41
FOXN3-212ENST00000556541 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
FOXN3-212ENST00000556541 TANC1Q9C0D5 1861 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 TMEM150BA6NC51 233 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 H0YCG3 227 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 KLRC4O43908 158 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 TRAK2O60296 914 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
FOXN3-212ENST00000556541 RHOBTB3O94955 611 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 CD4P01730 458 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 ALCAMQ13740 583 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 PCBP1Q15365 356 aaKnown RBP eCLIP12.48□□□□□ -0.41
FOXN3-212ENST00000556541 GDF6Q6KF10 455 aaPredicted RBP12.48□□□□□ -0.41
FOXN3-212ENST00000556541 SLC39A5Q6ZMH5 540 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 ZNF410Q86VK4 478 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 FAM126BQ8IXS8 530 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 CAGE1Q8TC20 777 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 PSPC1Q8WXF1 523 aaKnown RBP12.48□□□□□ -0.41
FOXN3-212ENST00000556541 CCDC47Q96A33 483 aaKnown RBP12.48□□□□□ -0.41
FOXN3-212ENST00000556541 CTAGE1Q96RT6 745 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 MAP7D2Q96T17 732 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 PARVGQ9HBI0 331 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 RMND1Q9NWS8 449 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 KIAA1468Q9P260 1216 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 SQORQ9Y6N5 450 aa12.48□□□□□ -0.41
FOXN3-212ENST00000556541 ALPK3Q96L96 1907 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 TLR3O15455 904 aaKnown RBP12.47□□□□□ -0.41
FOXN3-212ENST00000556541 HIP1RO75146 1068 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
FOXN3-212ENST00000556541 SSBP05455 408 aaKnown RBP eCLIP12.47□□□□□ -0.41
FOXN3-212ENST00000556541 PLS3P13797 630 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 PPP1R2P41236 205 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 NAMPTP43490 491 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 AFMP43652 599 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
FOXN3-212ENST00000556541 CUL4BQ13620 913 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 HIC1Q14526 733 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 FAM26DQ5JW98 314 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 EFCAB12Q6NXP0 572 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 RSPH3Q86UC2 560 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 KIAA0319LQ8IZA0 1049 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 VTI1AQ96AJ9 217 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 HVCN1Q96D96 273 aa12.47□□□□□ -0.41
FOXN3-212ENST00000556541 UBE4BO95155 1302 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 A0A087WWV3 80 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 PITPNM1O00562 1244 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 TREHO43280 583 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 FAM13AO94988 1023 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 PARNO95453 639 aaKnown RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 MYCP01106 439 aaPredicted RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 MYCNP04198 464 aaPredicted RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 RPN1P04843 607 aaKnown RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 KRT18P05783 430 aaKnown RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 CYP2C9P11712 490 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 NCKAP1LP55160 1127 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 SOX10P56693 466 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 ASIC1P78348 528 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 COASYQ13057 564 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 DMP1Q13316 513 aaPredicted RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 TFDP1Q14186 410 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 PTGISQ16647 500 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 TRIM71Q2Q1W2 868 aaKnown RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 CT47A1Q5JQC4 288 aaPredicted RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 CDCA2Q69YH5 1023 aaPredicted RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 FOXR2Q6PJQ5 311 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 CCDC155Q8N6L0 562 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 TRAPPC12Q8WVT3 735 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 SMARCE1Q969G3 411 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 PAWRQ96IZ0 340 aaKnown RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 IFT74Q96LB3 600 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 FIZ1Q96SL8 496 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 SENP6Q9GZR1 1112 aaPredicted RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 POLR3FQ9H1D9 316 aaPredicted RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 C2orf40Q9H1Z8 148 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 PANK4Q9NVE7 773 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 TMEM63CQ9P1W3 806 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 SUCLA2Q9P2R7 463 aaPredicted RBP12.46□□□□□ -0.41
FOXN3-212ENST00000556541 PCDHA5Q9Y5H7 936 aa12.46□□□□□ -0.41
FOXN3-212ENST00000556541 DCDC2CA8MYV0 355 aa12.45□□□□□ -0.42
FOXN3-212ENST00000556541 EIF3DO15371 548 aaKnown RBP eCLIP12.45□□□□□ -0.42
FOXN3-212ENST00000556541 B4GALT4O60513 344 aa12.45□□□□□ -0.42
FOXN3-212ENST00000556541 PPP1R37O75864 691 aa12.45□□□□□ -0.42
FOXN3-212ENST00000556541 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
FOXN3-212ENST00000556541 GLRA2P23416 452 aa12.45□□□□□ -0.42
FOXN3-212ENST00000556541 EFNA5P52803 228 aa12.45□□□□□ -0.42
FOXN3-212ENST00000556541 SMTNP53814 917 aa12.45□□□□□ -0.42
FOXN3-212ENST00000556541 IGBP1P78318 339 aa12.45□□□□□ -0.42
FOXN3-212ENST00000556541 PNOCQ13519 176 aa12.45□□□□□ -0.42
FOXN3-212ENST00000556541 DHX8Q14562 1220 aaKnown RBP12.45□□□□□ -0.42
FOXN3-212ENST00000556541 FAM47CQ5HY64 1035 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms