RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CCDC194A0A1B0GVG4 234 aa25.42■■□□□ 1.66
ACTN1-220ENST00000556433 DDX11L8A8MPP1 907 aa25.42■■□□□ 1.66
ACTN1-220ENST00000556433 PFKFB2O60825 505 aa25.42■■□□□ 1.66
ACTN1-220ENST00000556433 STBD1O95210 358 aa25.42■■□□□ 1.66
ACTN1-220ENST00000556433 DARSP14868 501 aaKnown RBP25.42■■□□□ 1.66
ACTN1-220ENST00000556433 XBP1P17861 261 aa25.42■■□□□ 1.66
ACTN1-220ENST00000556433 ADGRD2Q7Z7M1 963 aa25.42■■□□□ 1.66
ACTN1-220ENST00000556433 MICAL1Q8TDZ2 1067 aa25.42■■□□□ 1.66
ACTN1-220ENST00000556433 NLRP7Q8WX94 980 aa25.42■■□□□ 1.66
ACTN1-220ENST00000556433 HCSTQ9UBK5 93 aa25.42■■□□□ 1.66
ACTN1-220ENST00000556433 PRKAG3Q9UGI9 489 aa25.42■■□□□ 1.66
ACTN1-220ENST00000556433 TMEM150BA6NC51 233 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 DTNBO60941 627 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 TBX10O75333 385 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 UBE3AQ05086 875 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 DRP2Q13474 957 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 RBM23Q86U06 439 aaKnown RBP25.41■■□□□ 1.66
ACTN1-220ENST00000556433 THNSL1Q8IYQ7 743 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 COLGALT1Q8NBJ5 622 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 SH2D3AQ9BRG2 576 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 TMEM117Q9H0C3 514 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 CWH43Q9H720 699 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 PPP4R2Q9NY27 417 aa25.41■■□□□ 1.66
ACTN1-220ENST00000556433 ATG2AQ2TAZ0 1938 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 SLC37A4O43826 429 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 FGF18O76093 207 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 FGFR4P22455 802 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 NRIP1P48552 1158 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 NDUFV1P49821 464 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 CDC42EP1Q00587 391 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 EFHBQ8N7U6 833 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 CEP89Q96ST8 783 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 GJB4Q9NTQ9 266 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 CD207Q9UJ71 328 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 PCDHGC5Q9Y5F6 944 aa25.4■■□□□ 1.66
ACTN1-220ENST00000556433 STK36Q9NRP7 1315 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 WDR81Q562E7 1941 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 FAM86C2PA6NEL3 165 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 HOXA2O43364 376 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 MBTPS2O43462 519 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 GPR37L1O60883 481 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 DNM2P50570 870 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 PSMC5P62195 406 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 ZP2Q05996 745 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 SMAD2Q15796 467 aaKnown RBP25.39■■□□□ 1.66
ACTN1-220ENST00000556433 CSPP1Q1MSJ5 1256 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 NEK8Q86SG6 692 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 ECHDC2Q86YB7 292 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 ADHFE1Q8IWW8 467 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 RNF169Q8NCN4 708 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 CASD1Q96PB1 797 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 GCOM2Q9BZD3 368 aaPredicted RBP25.39■■□□□ 1.66
ACTN1-220ENST00000556433 RNF19AQ9NV58 838 aa25.39■■□□□ 1.66
ACTN1-220ENST00000556433 KIAA1671Q9BY89 1806 aa25.39■■□□□ 1.65
ACTN1-220ENST00000556433 IGKV6-21A0A0C4DH24 114 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 EML1O00423 815 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 CSDE1O75534 798 aaKnown RBP25.38■■□□□ 1.65
ACTN1-220ENST00000556433 LAG3P18627 525 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 ANAPC15P60006 121 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 SMAD4Q13485 552 aaKnown RBP25.38■■□□□ 1.65
ACTN1-220ENST00000556433 ANKRD1Q15327 319 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 PPP4R3AQ6IN85 833 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 LRRC55Q6ZSA7 311 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 ABI1Q8IZP0 508 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 OXER1Q8TDS5 423 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 FAM20AQ96MK3 541 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 TLE6Q9H808 572 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 C11orf16Q9NQ32 467 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 TLR9Q9NR96 1032 aa25.38■■□□□ 1.65
ACTN1-220ENST00000556433 FNDC1Q4ZHG4 1894 aaPredicted RBP25.38■■□□□ 1.65
ACTN1-220ENST00000556433 C19orf67A6NJJ6 358 aa25.37■■□□□ 1.65
ACTN1-220ENST00000556433 CTDNEP1O95476 244 aa25.37■■□□□ 1.65
ACTN1-220ENST00000556433 ALADP13716 330 aa25.37■■□□□ 1.65
ACTN1-220ENST00000556433 AK2P54819 239 aa25.37■■□□□ 1.65
ACTN1-220ENST00000556433 ERVFC1P60507 584 aa25.37■■□□□ 1.65
ACTN1-220ENST00000556433 PIK3AP1Q6ZUJ8 805 aa25.37■■□□□ 1.65
ACTN1-220ENST00000556433 KCNMB3Q9NPA1 279 aa25.37■■□□□ 1.65
ACTN1-220ENST00000556433 SUCLA2Q9P2R7 463 aaPredicted RBP25.37■■□□□ 1.65
ACTN1-220ENST00000556433 ORC3Q9UBD5 711 aaPredicted RBP25.37■■□□□ 1.65
ACTN1-220ENST00000556433 A0A087WZ62 844 aa25.36■■□□□ 1.65
ACTN1-220ENST00000556433 A0A0U1RQF3 1178 aa25.36■■□□□ 1.65
ACTN1-220ENST00000556433 MARCH6O60337 910 aa25.36■■□□□ 1.65
ACTN1-220ENST00000556433 CCNT1O60563 726 aaKnown RBP25.36■■□□□ 1.65
ACTN1-220ENST00000556433 MAFO75444 373 aaPredicted RBP25.36■■□□□ 1.65
ACTN1-220ENST00000556433 GCFC2P16383 781 aaKnown RBP25.36■■□□□ 1.65
ACTN1-220ENST00000556433 QARSP47897 775 aaKnown RBP25.36■■□□□ 1.65
ACTN1-220ENST00000556433 PPP2R5CQ13362 524 aa25.36■■□□□ 1.65
ACTN1-220ENST00000556433 ANO5Q75V66 913 aa25.36■■□□□ 1.65
ACTN1-220ENST00000556433 WASF1Q92558 559 aa25.36■■□□□ 1.65
ACTN1-220ENST00000556433 MSLNLQ96KJ4 702 aa25.36■■□□□ 1.65
ACTN1-220ENST00000556433 FDXACB1Q9BRP7 624 aaPredicted RBP25.36■■□□□ 1.65
ACTN1-220ENST00000556433 DACT1Q9NYF0 836 aa25.36■■□□□ 1.65
ACTN1-220ENST00000556433 CLEC1BQ9P126 229 aa25.36■■□□□ 1.65
ACTN1-220ENST00000556433 PUF60Q9UHX1 559 aaKnown RBP25.36■■□□□ 1.65
ACTN1-220ENST00000556433 VAV3Q9UKW4 847 aa25.36■■□□□ 1.65
ACTN1-220ENST00000556433 PER2O15055 1255 aa25.35■■□□□ 1.65
ACTN1-220ENST00000556433 EOMESO95936 686 aa25.35■■□□□ 1.65
ACTN1-220ENST00000556433 PLA2G4FQ68DD2 849 aa25.35■■□□□ 1.65
ACTN1-220ENST00000556433 PDE12Q6L8Q7 609 aaKnown RBP25.35■■□□□ 1.65
ACTN1-220ENST00000556433 RHPN2Q8IUC4 686 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms