RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 YWHAGP61981 247 aaKnown RBP eCLIP16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 QRICH1Q2TAL8 776 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 CAVIN3Q969G5 261 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 KRT1P04264 644 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 GLI1P08151 1106 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 ZNF564Q8TBZ8 553 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 TGS1Q96RS0 853 aaKnown RBP16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 PLEKHG2Q9H7P9 1386 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 TCP10L2B9ZVM9 353 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 INHBAP08476 426 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 HEMGNQ9BXL5 484 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 SLC24A3Q9HC58 644 aa16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 MRPL47Q9HD33 250 aaKnown RBP16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 TPX2Q9ULW0 747 aaKnown RBP16.15■□□□□ 0.18
ARHGEF40-207ENST00000556399 AGTP01019 485 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 RASA1P20936 1047 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 ANXA13P27216 316 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.172e-6■■□□□ 12
ARHGEF40-207ENST00000556399 ARHGEF16Q5VV41 709 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 PDCD7Q8N8D1 485 aaKnown RBP16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 SLC17A8Q8NDX2 589 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 AENQ8WTP8 325 aaKnown RBP16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 NUP85Q9BW27 656 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 CD248Q9HCU0 757 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 PPEF1O14829 653 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 AKR1B1P15121 316 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 STAT2P52630 851 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 SLC20A2Q08357 652 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 GRB10Q13322 594 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 SPARCL1Q14515 664 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 EDRF1Q3B7T1 1238 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 EPM2AIP1Q7L775 607 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 FBXO41Q8TF61 875 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 KMT5AQ9NQR1 393 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 CAMTA2O94983 1202 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 SYF2O95926 243 aaKnown RBP16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 PLS3P13797 630 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 MSH2P43246 934 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 MAP7D1Q3KQU3 841 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 DYDC2Q96IM9 177 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 SAYSD1Q9NPB0 183 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 PI4KBQ9UBF8 816 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 H0Y3Z8 333 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 DCTN3O75935 186 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 ELF1P32519 619 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 RASIP1Q5U651 963 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 KCNV2Q8TDN2 545 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 DCAF4Q8WV16 495 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 ETNK1Q9HBU6 452 aa16.14■□□□□ 0.17
ARHGEF40-207ENST00000556399 NTSR2O95665 410 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 RCN2Q14257 317 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 DLGAP5Q15398 846 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 MCF2L2Q86YR7 1114 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 CSRNP1Q96S65 589 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 ABCB11O95342 1321 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 LMTK3Q96Q04 1460 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 SERPINB2P05120 415 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 SF3B3Q15393 1217 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 CENPPQ6IPU0 288 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 METTL13Q8N6R0 699 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 TRIM4Q9C037 500 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 TCP11X1B4DZS4 312 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 H0YCG3 227 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 SORBS3O60504 671 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 OPHN1O60890 802 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 ABL1P00519 1130 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 ALCAMQ13740 583 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 ATP2A3Q93084 1043 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 MTMR8Q96EF0 704 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 PACSIN1Q9BY11 444 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 WNT8AQ9H1J5 351 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 ANKFY1Q9P2R3 1169 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 HSPA9P38646 679 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 MEA1Q16626 185 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 FAM196AQ6ZSG2 479 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 MDM1Q8TC05 714 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 PFASO15067 1338 aa16.13■□□□□ 0.17
ARHGEF40-207ENST00000556399 SLC16A3O15427 465 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 RBBP5Q15291 538 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 FBXO33Q7Z6M2 555 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 TRIM59Q8IWR1 403 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 CDAN1Q8IWY9 1227 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 XXYLT1Q8NBI6 393 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 C1orf54Q8WWF1 131 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 AGPAT1Q99943 283 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 DUSP9Q99956 384 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 REEP2Q9BRK0 252 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 NMT1P30419 496 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 DYNLT1P63172 113 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 KLHDC7AQ5VTJ3 777 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 CREG2Q8IUH2 290 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 MSL3Q8N5Y2 521 aaKnown RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 STK33Q9BYT3 514 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 EHD4Q9H223 541 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 TMBIM4Q9HC24 238 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 ZSCAN5CA6NGD5 496 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 GGPS1O95749 300 aa16.12■□□□□ 0.17
ARHGEF40-207ENST00000556399 CAV1Q03135 178 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms