RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 USP51Q70EK9 711 aa7.42□□□□□ -1.22
PRPF39-209ENST00000556353 Q8N1X5 172 aa7.42□□□□□ -1.22
PRPF39-209ENST00000556353 KCMF1Q9P0J7 381 aa7.42□□□□□ -1.22
PRPF39-209ENST00000556353 MAGEL2Q9UJ55 1249 aa7.42□□□□□ -1.22
PRPF39-209ENST00000556353 ZKSCAN5Q9Y2L8 839 aa7.42□□□□□ -1.22
PRPF39-209ENST00000556353 FZD7O75084 574 aa7.41□□□□□ -1.22
PRPF39-209ENST00000556353 HHEXQ03014 270 aa7.41□□□□□ -1.22
PRPF39-209ENST00000556353 ADCY1Q08828 1119 aa7.41□□□□□ -1.22
PRPF39-209ENST00000556353 RNF207Q6ZRF8 634 aa7.41□□□□□ -1.22
PRPF39-209ENST00000556353 ADGRE4PQ86SQ3 457 aa7.41□□□□□ -1.22
PRPF39-209ENST00000556353 RPGRQ92834 1020 aaKnown RBP7.41□□□□□ -1.22
PRPF39-209ENST00000556353 GCDHQ92947 438 aaPredicted RBP7.41□□□□□ -1.22
PRPF39-209ENST00000556353 ELF4Q99607 663 aaPredicted RBP7.41□□□□□ -1.22
PRPF39-209ENST00000556353 SPO11Q9Y5K1 396 aa7.41□□□□□ -1.22
PRPF39-209ENST00000556353 CD2APQ9Y5K6 639 aa7.41□□□□□ -1.22
PRPF39-209ENST00000556353 BCAR1P56945 870 aa7.4□□□□□ -1.22
PRPF39-209ENST00000556353 ANTXR2P58335 489 aa7.4□□□□□ -1.22
PRPF39-209ENST00000556353 RIN1Q13671 783 aa7.4□□□□□ -1.22
PRPF39-209ENST00000556353 ZNF808Q8N4W9 903 aaPredicted RBP7.4□□□□□ -1.22
PRPF39-209ENST00000556353 APPBP2Q92624 585 aa7.4□□□□□ -1.22
PRPF39-209ENST00000556353 RABGGTAQ92696 567 aa7.4□□□□□ -1.22
PRPF39-209ENST00000556353 SLC7A6OSQ96CW6 309 aaPredicted RBP7.4□□□□□ -1.22
PRPF39-209ENST00000556353 TMEM176AQ96HP8 235 aa7.4□□□□□ -1.22
PRPF39-209ENST00000556353 ORAI3Q9BRQ5 295 aa7.4□□□□□ -1.22
PRPF39-209ENST00000556353 SLC6A15Q9H2J7 730 aa7.4□□□□□ -1.22
PRPF39-209ENST00000556353 IFT57Q9NWB7 429 aa7.4□□□□□ -1.22
PRPF39-209ENST00000556353 OXSMQ9NWU1 459 aa7.4□□□□□ -1.22
PRPF39-209ENST00000556353 GAS7O60861 476 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 ADCY7P51828 1080 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 NEK4P51957 841 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 ATP2C1P98194 919 aaPredicted RBP7.39□□□□□ -1.23
PRPF39-209ENST00000556353 FOXE3Q13461 319 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 C21orf62-AS1Q17RA5 79 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 C16orf86Q6ZW13 317 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 SGMS1Q86VZ5 419 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 KIF18BQ86Y91 864 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 D2HGDHQ8N465 521 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 C7orf31Q8N865 590 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 EXTL1Q92935 676 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 DYDC2Q96IM9 177 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 ZNF341Q9BYN7 854 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 SCAND2PQ9GZW5 306 aaPredicted RBP7.39□□□□□ -1.23
PRPF39-209ENST00000556353 AGO3Q9H9G7 860 aaKnown RBP7.39□□□□□ -1.23
PRPF39-209ENST00000556353 TLR9Q9NR96 1032 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 TOMM22Q9NS69 142 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 FANCLQ9NW38 375 aa7.39□□□□□ -1.23
PRPF39-209ENST00000556353 RBM8AQ9Y5S9 174 aaKnown RBP7.39□□□□□ -1.23
PRPF39-209ENST00000556353 BICRAQ9NZM4 1560 aa7.38□□□□□ -1.23
PRPF39-209ENST00000556353 A0A1W2PRX2 142 aa7.38□□□□□ -1.23
PRPF39-209ENST00000556353 MAFGO15525 162 aa7.38□□□□□ -1.23
PRPF39-209ENST00000556353 KPNA6O60684 536 aa7.38□□□□□ -1.23
PRPF39-209ENST00000556353 ATP2A2P16615 1042 aaKnown RBP7.38□□□□□ -1.23
PRPF39-209ENST00000556353 HIBADHP31937 336 aaKnown RBP7.38□□□□□ -1.23
PRPF39-209ENST00000556353 MYBPC3Q14896 1274 aa7.38□□□□□ -1.23
PRPF39-209ENST00000556353 CREB3L3Q68CJ9 461 aa7.38□□□□□ -1.23
PRPF39-209ENST00000556353 TIGD7Q6NT04 549 aaPredicted RBP7.38□□□□□ -1.23
PRPF39-209ENST00000556353 ESRP1Q6NXG1 681 aaKnown RBP7.38□□□□□ -1.23
PRPF39-209ENST00000556353 BMP8AQ7Z5Y6 402 aa7.38□□□□□ -1.23
PRPF39-209ENST00000556353 PHYKPLQ8IUZ5 450 aa7.38□□□□□ -1.23
PRPF39-209ENST00000556353 ZZZ3Q8IYH5 903 aa7.38□□□□□ -1.23
PRPF39-209ENST00000556353 NKD2Q969F2 451 aaPredicted RBP7.38□□□□□ -1.23
PRPF39-209ENST00000556353 WDR92Q96MX6 357 aa7.38□□□□□ -1.23
PRPF39-209ENST00000556353 POLR3BQ9NW08 1133 aaPredicted RBP7.38□□□□□ -1.23
PRPF39-209ENST00000556353 CYR61O00622 381 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 POU3F2P20265 443 aaPredicted RBP7.37□□□□□ -1.23
PRPF39-209ENST00000556353 ACRV1P26436 265 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 ACVRL1P37023 503 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 STAT3P40763 770 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 BPIFB4P59827 614 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 TCIRG1Q13488 830 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 MIIPQ5JXC2 388 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 LRRTM3Q86VH5 581 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 C1orf210Q8IVY1 113 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 NINJ1Q92982 152 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 RPL10LQ96L21 214 aaKnown RBP7.37□□□□□ -1.23
PRPF39-209ENST00000556353 MPHOSPH9Q99550 1183 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 SYNPO2Q9UMS6 1093 aa7.37□□□□□ -1.23
PRPF39-209ENST00000556353 C2orf78A6NCI8 922 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 GOLGA8BA8MQT2 603 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 APOL3O95236 402 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 F2P00734 622 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 ADCY2Q08462 1091 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 SAFB2Q14151 953 aaKnown RBP eCLIP7.36□□□□□ -1.23
PRPF39-209ENST00000556353 ACAP1Q15027 740 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 TKFCQ3LXA3 575 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 CNNM4Q6P4Q7 775 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 ANKRD53Q8N9V6 530 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 ZNF503Q96F45 646 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 SORCS2Q96PQ0 1159 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 CSRNP2Q9H175 543 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 H2AFY2Q9P0M6 372 aaPredicted RBP7.36□□□□□ -1.23
PRPF39-209ENST00000556353 HS3ST3A1Q9Y663 406 aa7.36□□□□□ -1.23
PRPF39-209ENST00000556353 CAPN14A8MX76 684 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 CYP27B1O15528 508 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 CDC45O75419 566 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 PRPF6O94906 941 aaKnown RBP7.35□□□□□ -1.23
PRPF39-209ENST00000556353 KANSL1Q7Z3B3 1105 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 CLEC14AQ86T13 490 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 PASD1Q8IV76 773 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 ZFPM1Q8IX07 1006 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms