RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 MN1Q10571 1320 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-215ENST00000556011 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-215ENST00000556011 PBX3P40426 434 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 EPHA5P54756 1037 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 UCNP55089 124 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 VAC14Q08AM6 782 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 PTGDRQ13258 359 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 CCDC57Q2TAC2 916 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 BEND3Q5T5X7 828 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 TATDN1Q6P1N9 297 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 SPNS3Q6ZMD2 512 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 SNRNP27Q8WVK2 155 aaKnown RBP9.19□□□□□ -0.94
PSEN1-215ENST00000556011 FAM3CQ92520 227 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 PCGF6Q9BYE7 350 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 PPP1R9AQ9ULJ8 1098 aa9.19□□□□□ -0.94
PSEN1-215ENST00000556011 CCDC163A0A0D9SF12 145 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 CCDC195A0A1B0GUA6 201 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 EXTL3O43909 919 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 PSEN2P49810 448 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 ATXN3P54252 364 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-215ENST00000556011 NCAPHQ15003 741 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 TESK1Q15569 626 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 RTN4RL1Q86UN2 441 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-215ENST00000556011 ARID3BQ8IVW6 561 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-215ENST00000556011 DHX37Q8IY37 1157 aaKnown RBP9.18□□□□□ -0.94
PSEN1-215ENST00000556011 CPXCR1Q8N123 301 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 ZNF710Q8N1W2 664 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 KAZALD1Q96I82 304 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 GPRC5CQ9NQ84 441 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 TOR4AQ9NXH8 423 aa9.18□□□□□ -0.94
PSEN1-215ENST00000556011 MTCL1Q9Y4B5 1905 aaKnown RBP9.18□□□□□ -0.94
PSEN1-215ENST00000556011 LCTP09848 1927 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 CLDN1O95832 211 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 GHRP10912 638 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 IBSPP21815 317 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-215ENST00000556011 GBP1P32455 592 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 KRT17Q04695 432 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 G3BP1Q13283 466 aaKnown RBP eCLIP9.17□□□□□ -0.94
PSEN1-215ENST00000556011 NAA30Q147X3 362 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-215ENST00000556011 CERKLQ49MI3 558 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-215ENST00000556011 GLRX5Q86SX6 157 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 MAPKAPK5Q8IW41 473 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 LINC01465Q8N7H1 131 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 SH3RF3Q8TEJ3 882 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-215ENST00000556011 ZNF384Q8TF68 577 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 CWH43Q9H720 699 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 CABP5Q9NP86 173 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 SAP30BPQ9UHR5 308 aaKnown RBP9.17□□□□□ -0.94
PSEN1-215ENST00000556011 LRRK1Q38SD2 2015 aa9.17□□□□□ -0.94
PSEN1-215ENST00000556011 NRCAMQ92823 1304 aa9.16□□□□□ -0.94
PSEN1-215ENST00000556011 RBM47A0AV96 593 aaKnown RBP9.16□□□□□ -0.94
PSEN1-215ENST00000556011 TBKBP1A7MCY6 615 aa9.16□□□□□ -0.94
PSEN1-215ENST00000556011 KCNAB3O43448 404 aa9.16□□□□□ -0.94
PSEN1-215ENST00000556011 ATXN1LP0C7T5 689 aaKnown RBP9.16□□□□□ -0.94
PSEN1-215ENST00000556011 SKIDA1Q1XH10 827 aa9.16□□□□□ -0.94
PSEN1-215ENST00000556011 KIAA0753Q2KHM9 967 aa9.16□□□□□ -0.94
PSEN1-215ENST00000556011 SMTNL2Q2TAL5 461 aa9.16□□□□□ -0.94
PSEN1-215ENST00000556011 LMBR1LQ6UX01 489 aa9.16□□□□□ -0.94
PSEN1-215ENST00000556011 NAXDQ8IW45 347 aa9.16□□□□□ -0.94
PSEN1-215ENST00000556011 PHF20Q9BVI0 1012 aa9.16□□□□□ -0.94
PSEN1-215ENST00000556011 CCDC8Q9H0W5 538 aaPredicted RBP9.16□□□□□ -0.94
PSEN1-215ENST00000556011 PLAAQ9Y263 795 aa9.16□□□□□ -0.94
PSEN1-215ENST00000556011 TNRC6BQ9UPQ9 1833 aaKnown RBP9.16□□□□□ -0.94
PSEN1-215ENST00000556011 NSD1Q96L73 2696 aaPredicted RBP9.16□□□□□ -0.94
PSEN1-215ENST00000556011 MYLKQ15746 1914 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 A0A087X0B3 334 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 GOLGA8CPA6NN73 597 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 DKK1O94907 266 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 MAP4K4O95819 1239 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-215ENST00000556011 STAG3L1P0CL83 205 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 MYBP10242 640 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 LAG3P18627 525 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 MFSD10Q14728 455 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 LINC00303Q3SY05 128 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 ERICH1Q86X53 443 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 SMG7Q92540 1137 aaKnown RBP9.15□□□□□ -0.94
PSEN1-215ENST00000556011 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.15□□□□□ -0.94
PSEN1-215ENST00000556011 ABCF2Q9UG63 623 aa9.15□□□□□ -0.94
PSEN1-215ENST00000556011 HELZP42694 1942 aaKnown RBP9.15□□□□□ -0.95
PSEN1-215ENST00000556011 PDCD11Q14690 1871 aaKnown RBP9.15□□□□□ -0.95
PSEN1-215ENST00000556011 FOCADQ5VW36 1801 aa9.15□□□□□ -0.95
PSEN1-215ENST00000556011 COL4A2P08572 1712 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 UBE4BO95155 1302 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 MECOMQ03112 1051 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 PPP2R5BQ15173 497 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 SMAD1Q15797 465 aaKnown RBP9.14□□□□□ -0.95
PSEN1-215ENST00000556011 WDR44Q5JSH3 913 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 PMS2CLQ68D20 193 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 MTSS1LQ765P7 747 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 PRIMA1Q86XR5 153 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 MINDY1Q8N5J2 469 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 VGLL2Q8N8G2 317 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 HOMER2Q9NSB8 354 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 FBXO40Q9UH90 709 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 INVSQ9Y283 1065 aa9.14□□□□□ -0.95
PSEN1-215ENST00000556011 PCDH15Q96QU1 1955 aa9.13□□□□□ -0.95
PSEN1-215ENST00000556011 ANO9A1A5B4 782 aa9.13□□□□□ -0.95
PSEN1-215ENST00000556011 INPPL1O15357 1258 aa9.13□□□□□ -0.95
PSEN1-215ENST00000556011 CBFA2T3O75081 653 aa9.13□□□□□ -0.95
PSEN1-215ENST00000556011 RFPL2O75678 378 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms