RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 SMIM10L2AP0DMW4 78 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 SMIM10L2BP0DMW5 78 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 GNAT1P11488 350 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 DNM2P50570 870 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 MTFR1Q15390 333 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 GRIK4Q16099 956 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 FAM26FQ5R3K3 315 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 CCSAPQ6IQ19 270 aaPredicted RBP12.21□□□□□ -0.45
TMEM260-208ENST00000555905 MLKLQ8NB16 471 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 TRAPPC12Q8WVT3 735 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 VTI1AQ96AJ9 217 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 ARMC5Q96C12 935 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 DEFB118Q96PH6 123 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 CEP89Q96ST8 783 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 FUCA2Q9BTY2 467 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 NAT10Q9H0A0 1025 aaKnown RBP12.21□□□□□ -0.45
TMEM260-208ENST00000555905 PRDM10Q9NQV6 1147 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 PDLIM7Q9NR12 457 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 LARSQ9P2J5 1176 aaKnown RBP12.21□□□□□ -0.45
TMEM260-208ENST00000555905 KCNG1Q9UIX4 513 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 SCN10AQ9Y5Y9 1956 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 SFI1A8K8P3 1242 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 CAVIN2O95810 425 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 PLS3P13797 630 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 KLRC1P26715 233 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 TMOD1P28289 359 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 PPP1R2P41236 205 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 ZNF131P52739 623 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 ACLYP53396 1101 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 RTP1P59025 263 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 EHHADHQ08426 723 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 MAPK7Q13164 816 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 DMP1Q13316 513 aaPredicted RBP12.2□□□□□ -0.46
TMEM260-208ENST00000555905 STIM1Q13586 685 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 DPCR1Q3MIW9 517 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 ODR4Q5SWX8 454 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 IER5Q5VY09 327 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 MTHFD1LQ6UB35 978 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 SFR1Q86XK3 245 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 METTL13Q8N6R0 699 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 SLC17A8Q8NDX2 589 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 ZNF333Q96JL9 665 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 IFT74Q96LB3 600 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 POLR3FQ9H1D9 316 aaPredicted RBP12.2□□□□□ -0.46
TMEM260-208ENST00000555905 MRPL44Q9H9J2 332 aaKnown RBP12.2□□□□□ -0.46
TMEM260-208ENST00000555905 SUGCTQ9HAC7 445 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 C17orf75Q9HAS0 396 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 POLD4Q9HCU8 107 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 XPNPEP1Q9NQW7 623 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 SETD4Q9NVD3 440 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 TBC1D7Q9P0N9 293 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 CENPFP49454 3210 aa12.2□□□□□ -0.46
TMEM260-208ENST00000555905 IGKV6-21A0A0C4DH24 114 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 C17orf102A2RUQ5 167 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 DNM1LO00429 736 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 KIF20AO95235 890 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 C22orf31O95567 290 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 CHRM1P11229 460 aaPredicted RBP12.19□□□□□ -0.46
TMEM260-208ENST00000555905 BMP6P22004 513 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 SMTNP53814 917 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 SOX10P56693 466 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 PPP2R5AQ15172 486 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 NBPF20Q3BBV1 942 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 ANO6Q4KMQ2 910 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 EFCAB12Q6NXP0 572 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 STXBP4Q6ZWJ1 553 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 FAM178BQ8IXR5 827 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 DAW1Q8N136 415 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 LMBR1Q8WVP7 490 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 PSPC1Q8WXF1 523 aaKnown RBP12.19□□□□□ -0.46
TMEM260-208ENST00000555905 HPS3Q969F9 1004 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 TMEM143Q96AN5 459 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 DNAJC25Q9H1X3 360 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 SLC39A2Q9NP94 309 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 GPRC5CQ9NQ84 441 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 OLFML3Q9NRN5 406 aa12.19□□□□□ -0.46
TMEM260-208ENST00000555905 EVPLQ92817 2033 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 CCDC169A6NNP5 214 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 H0YCG3 227 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 TFRCP02786 760 aaKnown RBP12.18□□□□□ -0.46
TMEM260-208ENST00000555905 MAPTP10636 758 aaKnown RBP12.18□□□□□ -0.46
TMEM260-208ENST00000555905 ARL2P36404 184 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 PEX3P56589 373 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 STK4Q13043 487 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 ALCAMQ13740 583 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 MXD4Q14582 209 aaPredicted RBP12.18□□□□□ -0.46
TMEM260-208ENST00000555905 COBLL1Q53SF7 1204 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 FAM47CQ5HY64 1035 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 CT47A1Q5JQC4 288 aaPredicted RBP12.18□□□□□ -0.46
TMEM260-208ENST00000555905 L1TD1Q5T7N2 865 aaKnown RBP12.18□□□□□ -0.46
TMEM260-208ENST00000555905 NFRKBQ6P4R8 1299 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 SMYD4Q8IYR2 804 aaPredicted RBP12.18□□□□□ -0.46
TMEM260-208ENST00000555905 LRRC71Q8N4P6 559 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 KIAA0895Q8NCT3 520 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 SPIRE2Q8WWL2 714 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
TMEM260-208ENST00000555905 MAP7D2Q96T17 732 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 KMT5AQ9NQR1 393 aa12.18□□□□□ -0.46
TMEM260-208ENST00000555905 SUCLA2Q9P2R7 463 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms