RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TRAIPQ9BWF2 469 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 TMEM117Q9H0C3 514 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 KCNMB3Q9NPA1 279 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 CD320Q9NPF0 282 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 PPP4R2Q9NY27 417 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 LZTS1Q9Y250 596 aa14.29□□□□□ -0.12
HNRNPC-221ENST00000555883 CCDC194A0A1B0GVG4 234 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 TBKBP1A7MCY6 615 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 DKC1O60832 514 aaKnown RBP eCLIP14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 STBD1O95210 358 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 EOMESO95936 686 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 LAG3P18627 525 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 GATMP50440 423 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 DNM2P50570 870 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 PSMC5P62195 406 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 ADAM15Q13444 863 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 SMAD2Q15796 467 aaKnown RBP14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 FAM102BQ5T8I3 360 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 TRMT1LQ7Z2T5 733 aaKnown RBP14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 ZNF410Q86VK4 478 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 LOXHD1Q8IVV2 1947 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 ADHFE1Q8IWW8 467 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 EXOC8Q8IYI6 725 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 EFHBQ8N7U6 833 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 POP1Q99575 1024 aaKnown RBP14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 LARP6Q9BRS8 491 aaKnown RBP14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 EPHX3Q9H6B9 360 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 CHST12Q9NRB3 414 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 TPCN1Q9ULQ1 816 aa14.28□□□□□ -0.12
HNRNPC-221ENST00000555883 ATG2AQ2TAZ0 1938 aa14.27□□□□□ -0.12
HNRNPC-221ENST00000555883 KIAA1671Q9BY89 1806 aa14.27□□□□□ -0.12
HNRNPC-221ENST00000555883 A0A0U1RQF3 1178 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 SLC37A4O43826 429 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 MAFO75444 373 aaPredicted RBP14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 EYA4O95677 639 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 ALADP13716 330 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 PLCB3Q01970 1234 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 ZP2Q05996 745 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 SMAD4Q13485 552 aaKnown RBP14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 INF2Q27J81 1249 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 TMEM31Q5JXX7 168 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 ECHDC2Q86YB7 292 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 COLGALT1Q8NBJ5 622 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 KHSRPQ92945 711 aaKnown RBP eCLIP14.27□□□□□ -0.132e-7■■■□□ 17.4
HNRNPC-221ENST00000555883 GJA10Q969M2 543 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 MSLNLQ96KJ4 702 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 PPP1R16BQ96T49 567 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 CDCA3Q99618 268 aaPredicted RBP14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 GCOM2Q9BZD3 368 aaPredicted RBP14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 INO80BQ9C086 356 aaPredicted RBP14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 CWH43Q9H720 699 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 TYW1Q9NV66 732 aaKnown RBP14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 DACT1Q9NYF0 836 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 SEPT9Q9UHD8 586 aaPredicted RBP14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 VAV3Q9UKW4 847 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 KCNJ14Q9UNX9 436 aa14.27□□□□□ -0.13
HNRNPC-221ENST00000555883 CARNS1A5YM72 827 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 MBTPS2O43462 519 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 TBX10O75333 385 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 FGF18O76093 207 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 FGFR1P11362 822 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 IRS1P35568 1242 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 PPM1AP35813 382 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 QARSP47897 775 aaKnown RBP14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 COASYQ13057 564 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 LETM2Q2VYF4 491 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 EP400NLQ6ZTU2 488 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 ANO5Q75V66 913 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 LRRC43Q8N309 656 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 NLRP7Q8WX94 980 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 CASD1Q96PB1 797 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 TLR9Q9NR96 1032 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 RNF19AQ9NV58 838 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 CD207Q9UJ71 328 aa14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 FNDC1Q4ZHG4 1894 aaPredicted RBP14.26□□□□□ -0.13
HNRNPC-221ENST00000555883 EVPLQ92817 2033 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 WDR81Q562E7 1941 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 FSCN2O14926 492 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 GAS2O43903 313 aaKnown RBP14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 CTDNEP1O95476 244 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 P4HBP07237 508 aaKnown RBP14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 SKIP12755 728 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 SFPQP23246 707 aaKnown RBP eCLIP14.25□□□□□ -0.139e-7■■■□□ 16.4
HNRNPC-221ENST00000555883 SSTR3P32745 418 aaPredicted RBP14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 AK2P54819 239 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 DLX2Q07687 328 aaPredicted RBP14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 MTERF2Q49AM1 385 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 SPOUT1Q5T280 376 aaKnown RBP14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 ZNF598Q86UK7 904 aaKnown RBP14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 SLFN12Q8IYM2 578 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 ABI1Q8IZP0 508 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 SMRP1Q8NCR6 262 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 SCLT1Q96NL6 688 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 LRFN3Q9BTN0 628 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 MRPL9Q9BYD2 267 aaKnown RBP14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 C11orf16Q9NQ32 467 aa14.25□□□□□ -0.13
HNRNPC-221ENST00000555883 C5orf42Q9H799 3197 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 EML1O00423 815 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 CCNT1O60563 726 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms