RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 QARSP47897 775 aaKnown RBP17.31■□□□□ 0.36
SNX6-205ENST00000555648 HYAL1Q12794 435 aa17.31■□□□□ 0.36
SNX6-205ENST00000555648 PPP2R5CQ13362 524 aa17.31■□□□□ 0.36
SNX6-205ENST00000555648 TARBP2Q15633 366 aaKnown RBP17.31■□□□□ 0.36
SNX6-205ENST00000555648 EXOC8Q8IYI6 725 aa17.31■□□□□ 0.36
SNX6-205ENST00000555648 SPPL3Q8TCT6 385 aa17.31■□□□□ 0.36
SNX6-205ENST00000555648 INO80BQ9C086 356 aaPredicted RBP17.31■□□□□ 0.36
SNX6-205ENST00000555648 TMEM117Q9H0C3 514 aa17.31■□□□□ 0.36
SNX6-205ENST00000555648 CHD7Q9P2D1 2997 aa17.31■□□□□ 0.36
SNX6-205ENST00000555648 SUCLA2Q9P2R7 463 aaPredicted RBP17.31■□□□□ 0.36
SNX6-205ENST00000555648 TTC3P53804 2025 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 TBX3O15119 743 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 P4HBP07237 508 aaKnown RBP17.3■□□□□ 0.36
SNX6-205ENST00000555648 SFPQP23246 707 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNX6-205ENST00000555648 NDUFV1P49821 464 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 FAM189BP81408 668 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 UBE3AQ05086 875 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 DSC3Q14574 896 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 B3GNT9Q6UX72 402 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 RHPN2Q8IUC4 686 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 SLFN12Q8IYM2 578 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 GJD3Q8N144 294 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 OXER1Q8TDS5 423 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 SLC7A3Q8WY07 619 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 SH2D3AQ9BRG2 576 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 KCNMB3Q9NPA1 279 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 GJB4Q9NTQ9 266 aa17.3■□□□□ 0.36
SNX6-205ENST00000555648 TYW1Q9NV66 732 aaKnown RBP17.3■□□□□ 0.36
SNX6-205ENST00000555648 PUF60Q9UHX1 559 aaKnown RBP17.3■□□□□ 0.36
SNX6-205ENST00000555648 TMEM150BA6NC51 233 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 DTNBO60941 627 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 CTDNEP1O95476 244 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 POLGP54098 1239 aaPredicted RBP17.29■□□□□ 0.36
SNX6-205ENST00000555648 ME3Q16798 604 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 NCAPH2Q6IBW4 605 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 OTUD6AQ7L8S5 288 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 ECHDC2Q86YB7 292 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 FAM178BQ8IXR5 827 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 LRRC43Q8N309 656 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 GTF3C6Q969F1 213 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 CEP170P1Q96L14 293 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 NLRP4Q96MN2 994 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 CYP26B1Q9NR63 512 aa17.29■□□□□ 0.36
SNX6-205ENST00000555648 EML1O00423 815 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 MAFO75444 373 aaPredicted RBP17.28■□□□□ 0.36
SNX6-205ENST00000555648 FGF18O76093 207 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 COL9A1P20849 921 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 FGFR4P22455 802 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 FOSBP53539 338 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 DRP2Q13474 957 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 COL19A1Q14993 1142 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 EPHA7Q15375 998 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 CLUL1Q15846 466 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 PLA2G4FQ68DD2 849 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 TWF2Q6IBS0 349 aaKnown RBP17.28■□□□□ 0.36
SNX6-205ENST00000555648 RBM23Q86U06 439 aaKnown RBP17.28■□□□□ 0.36
SNX6-205ENST00000555648 ZNF410Q86VK4 478 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 COLGALT1Q8NBJ5 622 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 TLE6Q9H808 572 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 TLR9Q9NR96 1032 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 CHST12Q9NRB3 414 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 VAV3Q9UKW4 847 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 PPME1Q9Y570 386 aa17.28■□□□□ 0.36
SNX6-205ENST00000555648 TCF20Q9UGU0 1960 aaKnown RBP17.28■□□□□ 0.36
SNX6-205ENST00000555648 A0A087WZ62 844 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 IGKV6-21A0A0C4DH24 114 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 A0A0U1RQF3 1178 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 CSDE1O75534 798 aaKnown RBP17.27■□□□□ 0.36
SNX6-205ENST00000555648 STBD1O95210 358 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 EOMESO95936 686 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 SKIP12755 728 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 DNAJB1P25685 340 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 IRS1P35568 1242 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 NRIP1P48552 1158 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 KRT17Q04695 432 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 NR5A1Q13285 461 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 CAMK1Q14012 370 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 SAFBQ15424 915 aaKnown RBP eCLIP17.27■□□□□ 0.36
SNX6-205ENST00000555648 CTC1Q2NKJ3 1217 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 PDE12Q6L8Q7 609 aaKnown RBP17.27■□□□□ 0.36
SNX6-205ENST00000555648 ANO5Q75V66 913 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 CATSPER4Q7RTX7 472 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 NSUN7Q8NE18 718 aaKnown RBP17.27■□□□□ 0.36
SNX6-205ENST00000555648 CCDC43Q96MW1 224 aaKnown RBP17.27■□□□□ 0.36
SNX6-205ENST00000555648 ZNF558Q96NG5 402 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 FDXACB1Q9BRP7 624 aaPredicted RBP17.27■□□□□ 0.36
SNX6-205ENST00000555648 LXNQ9BS40 222 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 MRPL9Q9BYD2 267 aaKnown RBP17.27■□□□□ 0.36
SNX6-205ENST00000555648 EPHX3Q9H6B9 360 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 PRKAG3Q9UGI9 489 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 CD207Q9UJ71 328 aa17.27■□□□□ 0.36
SNX6-205ENST00000555648 PIN4Q9Y237 131 aaKnown RBP17.27■□□□□ 0.36
SNX6-205ENST00000555648 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 FDPSP14324 419 aaKnown RBP17.26■□□□□ 0.35
SNX6-205ENST00000555648 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNX6-205ENST00000555648 PPM1AP35813 382 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 RFC5P40937 340 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 NPEPPSP55786 919 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 BMS1Q14692 1282 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms