RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TUBA3CQ13748 450 aa7.5□□□□□ -1.21
VRK1-203ENST00000555067 TUBA3EQ6PEY2 450 aa7.5□□□□□ -1.21
VRK1-203ENST00000555067 ADGRE4PQ86SQ3 457 aa7.5□□□□□ -1.21
VRK1-203ENST00000555067 ZNF808Q8N4W9 903 aaPredicted RBP7.5□□□□□ -1.21
VRK1-203ENST00000555067 SHCBP1Q8NEM2 672 aa7.5□□□□□ -1.21
VRK1-203ENST00000555067 FOXRED1Q96CU9 486 aaPredicted RBP7.5□□□□□ -1.21
VRK1-203ENST00000555067 OSBPL2Q9H1P3 480 aa7.5□□□□□ -1.21
VRK1-203ENST00000555067 ZNF703Q9H7S9 590 aaPredicted RBP7.5□□□□□ -1.21
VRK1-203ENST00000555067 ANKRD62A6NC57 917 aa7.49□□□□□ -1.21
VRK1-203ENST00000555067 IGFALSP35858 605 aa7.49□□□□□ -1.21
VRK1-203ENST00000555067 MECP2P51608 486 aaKnown RBP7.49□□□□□ -1.21
VRK1-203ENST00000555067 GRM7Q14831 915 aa7.49□□□□□ -1.21
VRK1-203ENST00000555067 NFE2L2Q16236 605 aa7.49□□□□□ -1.21
VRK1-203ENST00000555067 FNDC3BQ53EP0 1204 aaKnown RBP7.49□□□□□ -1.21
VRK1-203ENST00000555067 ZCCHC8Q6NZY4 707 aaKnown RBP7.49□□□□□ -1.21
VRK1-203ENST00000555067 ANKRD13AQ8IZ07 590 aa7.49□□□□□ -1.21
VRK1-203ENST00000555067 GPR135Q8IZ08 494 aa7.49□□□□□ -1.21
VRK1-203ENST00000555067 ERCC4Q92889 916 aaPredicted RBP7.49□□□□□ -1.21
VRK1-203ENST00000555067 ZG16BQ96DA0 208 aa7.49□□□□□ -1.21
VRK1-203ENST00000555067 MMRN2Q9H8L6 949 aa7.49□□□□□ -1.21
VRK1-203ENST00000555067 AURKAIP1Q9NWT8 199 aaPredicted RBP7.49□□□□□ -1.21
VRK1-203ENST00000555067 ADH4P08319 380 aa7.48□□□□□ -1.21
VRK1-203ENST00000555067 ROM1Q03395 351 aa7.48□□□□□ -1.21
VRK1-203ENST00000555067 KLHDC10Q6PID8 442 aa7.48□□□□□ -1.21
VRK1-203ENST00000555067 MRGPRGQ86SM5 289 aa7.48□□□□□ -1.21
VRK1-203ENST00000555067 BCL6BQ8N143 479 aaPredicted RBP7.48□□□□□ -1.21
VRK1-203ENST00000555067 LILRB2Q8N423 598 aa7.48□□□□□ -1.21
VRK1-203ENST00000555067 CHST14Q8NCH0 376 aa7.48□□□□□ -1.21
VRK1-203ENST00000555067 TLR9Q9NR96 1032 aa7.48□□□□□ -1.21
VRK1-203ENST00000555067 CTDP1Q9Y5B0 961 aaPredicted RBP7.48□□□□□ -1.21
VRK1-203ENST00000555067 M0R2C6 588 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 CYP27B1O15528 508 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 PPFIA2O75334 1257 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 H2AFYO75367 372 aaKnown RBP7.47□□□□□ -1.21
VRK1-203ENST00000555067 PRLP01236 227 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 KIF11P52732 1056 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 ZNF627Q7L945 461 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 ZNF483Q8TF39 744 aaPredicted RBP7.47□□□□□ -1.21
VRK1-203ENST00000555067 RABGGTAQ92696 567 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 GFM2Q969S9 779 aaKnown RBP7.47□□□□□ -1.21
VRK1-203ENST00000555067 CRAMP1Q96RY5 1269 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 ACSS2Q9NR19 701 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 SAMD15Q9P1V8 674 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 SAE1Q9UBE0 346 aaPredicted RBP7.47□□□□□ -1.21
VRK1-203ENST00000555067 DMRT1Q9Y5R6 373 aa7.47□□□□□ -1.21
VRK1-203ENST00000555067 GLRX3O76003 335 aaKnown RBP7.46□□□□□ -1.22
VRK1-203ENST00000555067 KRT37O76014 449 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 RAPGEF3O95398 923 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 ASLP04424 464 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 MAKP20794 623 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 HIBADHP31937 336 aaKnown RBP7.46□□□□□ -1.22
VRK1-203ENST00000555067 ADAM15Q13444 863 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 RIN1Q13671 783 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 D2HGDHQ8N465 521 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 VOPP1Q96AW1 172 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 MPHOSPH9Q99550 1183 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 PCIF1Q9H4Z3 704 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 CABP5Q9NP86 173 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 GIT1Q9Y2X7 761 aa7.46□□□□□ -1.22
VRK1-203ENST00000555067 DGKDQ16760 1214 aa7.45□□□□□ -1.22
VRK1-203ENST00000555067 ZNF662Q6ZS27 426 aa7.45□□□□□ -1.22
VRK1-203ENST00000555067 SGMS1Q86VZ5 419 aa7.45□□□□□ -1.22
VRK1-203ENST00000555067 OR5AN1Q8NGI8 311 aa7.45□□□□□ -1.22
VRK1-203ENST00000555067 SLC7A6OSQ96CW6 309 aaPredicted RBP7.45□□□□□ -1.22
VRK1-203ENST00000555067 MAML3Q96JK9 1138 aa7.45□□□□□ -1.22
VRK1-203ENST00000555067 DNAJC2Q99543 621 aaKnown RBP7.45□□□□□ -1.22
VRK1-203ENST00000555067 POLR3GLQ9BT43 218 aa7.45□□□□□ -1.22
VRK1-203ENST00000555067 SLC6A15Q9H2J7 730 aa7.45□□□□□ -1.22
VRK1-203ENST00000555067 TTBK1Q5TCY1 1321 aaPredicted RBP7.45□□□□□ -1.22
VRK1-203ENST00000555067 UBA6A0AVT1 1052 aaPredicted RBP7.44□□□□□ -1.22
VRK1-203ENST00000555067 CAPN14A8MX76 684 aa7.44□□□□□ -1.22
VRK1-203ENST00000555067 OPA1O60313 960 aa7.44□□□□□ -1.22
VRK1-203ENST00000555067 CYP17A1P05093 508 aa7.44□□□□□ -1.22
VRK1-203ENST00000555067 KRT4P19013 534 aa7.44□□□□□ -1.22
VRK1-203ENST00000555067 SLC6A3Q01959 620 aa7.44□□□□□ -1.22
VRK1-203ENST00000555067 Q6ZPA2 131 aa7.44□□□□□ -1.22
VRK1-203ENST00000555067 NME9Q86XW9 330 aa7.44□□□□□ -1.22
VRK1-203ENST00000555067 AGO3Q9H9G7 860 aaKnown RBP7.44□□□□□ -1.22
VRK1-203ENST00000555067 CEP72Q9P209 647 aa7.44□□□□□ -1.22
VRK1-203ENST00000555067 DENND2AQ9ULE3 1009 aa7.44□□□□□ -1.22
VRK1-203ENST00000555067 A0A1W2PRX2 142 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 H7C1D1 291 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 FLT3P36888 993 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 RGS3P49796 1198 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 ADCY7P51828 1080 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 COL10A1Q03692 680 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 ZNF174Q15697 407 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 TTC38Q5R3I4 469 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 SLFN12LQ6IEE8 588 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 DPY19L2P1Q6NXN4 242 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 GCDHQ92947 438 aaPredicted RBP7.43□□□□□ -1.22
VRK1-203ENST00000555067 TMEM176AQ96HP8 235 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 CLUHP3Q96NS8 147 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 PRRX2Q99811 253 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 KCMF1Q9P0J7 381 aa7.43□□□□□ -1.22
VRK1-203ENST00000555067 PTPDC1A2A3K4 754 aa7.42□□□□□ -1.22
VRK1-203ENST00000555067 DVL2O14641 736 aa7.42□□□□□ -1.22
VRK1-203ENST00000555067 NOP9Q86U38 636 aaKnown RBP7.42□□□□□ -1.22
VRK1-203ENST00000555067 ULK2Q8IYT8 1036 aa7.42□□□□□ -1.22
VRK1-203ENST00000555067 THEMISQ8N1K5 641 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms