RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	TMEM209	Q96SK2	561 aa		7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	XYLT2	Q9H1B5	865 aa		7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	DHX57	Q6P158	1386 aa	Known RBP	7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	TNS3	Q68CZ2	1445 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	GLRX3	O76003	335 aa	Known RBP	7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	SASH1	O94885	1247 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	APP	P05067	770 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	HOXA5	P20719	270 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	KCNC1	P48547	511 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	MLLT6	P55198	1093 aa	Predicted RBP	7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	VPS72	Q15906	364 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	EP400NL	Q6ZTU2	488 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	ZNF761	Q86XN6	746 aa	Predicted RBP	7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	NOSTRIN	Q8IVI9	506 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	ADAMTS17	Q8TE56	1095 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	ZCCHC14	Q8WYQ9	949 aa	Known RBP	7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	APPBP2	Q92624	585 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	SLC39A2	Q9NP94	309 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	GLI3	P10071	1580 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956	SBNO1	A3KN83	1393 aa		7.2	□□□□□ -1.26
PSMC6-208	ENST00000554956		A0A0G2JLL6	359 aa	Predicted RBP	7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	PRAMEF25	A6NGN4	478 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	ZNF839	A8K0R7	811 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956		M0R2C6	588 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	SCD	O00767	359 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	OPA1	O60313	960 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	C4BPA	P04003	597 aa	Known RBP	7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	ZNF28	P17035	718 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	IGFALS	P35858	605 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	GLRB	P48167	497 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	PFKP	Q01813	784 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	SKIDA1	Q1XH10	827 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	LCE4A	Q5TA78	99 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	NT5DC1	Q5TFE4	455 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	PRAMEF18	Q5VWM3	479 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	MCTP2	Q6DN12	878 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	ZCCHC8	Q6NZY4	707 aa	Known RBP	7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	HHIPL2	Q6UWX4	724 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	ADAM7	Q9H2U9	754 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	SAMD15	Q9P1V8	674 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	POGK	Q9P215	609 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	ADGRB1	O14514	1584 aa		7.19	□□□□□ -1.26
PSMC6-208	ENST00000554956	IFT172	Q9UG01	1749 aa		7.18	□□□□□ -1.26
PSMC6-208	ENST00000554956	CDC45	O75419	566 aa		7.18	□□□□□ -1.26
PSMC6-208	ENST00000554956	ASL	P04424	464 aa		7.18	□□□□□ -1.26
PSMC6-208	ENST00000554956	DBP	Q10586	325 aa	Predicted RBP	7.18	□□□□□ -1.26
PSMC6-208	ENST00000554956	TCEA2	Q15560	299 aa		7.18	□□□□□ -1.26
PSMC6-208	ENST00000554956	C16orf86	Q6ZW13	317 aa		7.18	□□□□□ -1.26
PSMC6-208	ENST00000554956	C20orf173	Q96LM9	149 aa		7.18	□□□□□ -1.26
PSMC6-208	ENST00000554956	DLL4	Q9NR61	685 aa		7.18	□□□□□ -1.26
PSMC6-208	ENST00000554956	ZFP69B	Q9UJL9	534 aa		7.18	□□□□□ -1.26
PSMC6-208	ENST00000554956	FMN2	Q9NZ56	1722 aa		7.18	□□□□□ -1.26
PSMC6-208	ENST00000554956	NOBOX	O60393	691 aa		7.17	□□□□□ -1.26
PSMC6-208	ENST00000554956	CLASP2	O75122	1294 aa	Known RBP	7.17	□□□□□ -1.26
PSMC6-208	ENST00000554956	CANX	P27824	592 aa	Known RBP	7.17	□□□□□ -1.26
PSMC6-208	ENST00000554956	MC4R	P32245	332 aa		7.17	□□□□□ -1.26
PSMC6-208	ENST00000554956	GJA4	P35212	333 aa		7.17	□□□□□ -1.26
PSMC6-208	ENST00000554956	IL13	P35225	146 aa		7.17	□□□□□ -1.26
PSMC6-208	ENST00000554956	DDX53	Q86TM3	631 aa	Known RBP	7.17	□□□□□ -1.26
PSMC6-208	ENST00000554956	BLM	P54132	1417 aa	Predicted RBP	7.17	□□□□□ -1.26
PSMC6-208	ENST00000554956	USP32	Q8NFA0	1604 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	KNDC1	Q76NI1	1749 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	SLC12A8	A0AV02	714 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	RFPL3	O75679	317 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	KRT37	O76014	449 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	IL18BP	O95998	194 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	MME	P08473	750 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	ENO2	P09104	434 aa	Predicted RBP	7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	JMJD7	P0C870	316 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	COL6A1	P12109	1028 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	MECP2	P51608	486 aa	Known RBP	7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	PIK3R6	Q5UE93	754 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	GIMAP6	Q6P9H5	292 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	TRMT10B	Q6PF06	316 aa	Known RBP	7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	KRT27	Q7Z3Y8	459 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	NOP9	Q86U38	636 aa	Known RBP	7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	STPG3	Q8N7X2	389 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	C2orf69	Q8N8R5	385 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	TXNDC5	Q8NBS9	432 aa	Known RBP	7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	ARHGAP20	Q9P2F6	1191 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	ARHGEF10	O15013	1369 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	ANKAR	Q7Z5J8	1434 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	DLC1	Q96QB1	1528 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	EP400	Q96L91	3159 aa		7.16	□□□□□ -1.26
PSMC6-208	ENST00000554956	GJA9	P57773	515 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	IRF9	Q00978	393 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	PKN3	Q6P5Z2	889 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	DHX37	Q8IY37	1157 aa	Known RBP	7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	SYNPO	Q8N3V7	929 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	IGDCC4	Q8TDY8	1250 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	DDX1	Q92499	740 aa	Known RBP	7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	WRNIP1	Q96S55	665 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	TACO1	Q9BSH4	297 aa	Known RBP	7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	L2HGDH	Q9H9P8	463 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	USP40	Q9NVE5	1235 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	BTBD7	Q9P203	1132 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	ARHGAP28	Q9P2N2	729 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	DUSP10	Q9Y6W6	482 aa		7.15	□□□□□ -1.26
PSMC6-208	ENST00000554956	RASSF10	A6NK89	507 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956		B4E1Z4	1266 aa		7.14	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms