RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 MYH1P12882 1939 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 ENOX2Q16206 610 aaKnown RBP16.92■□□□□ 0.3
SYNE3-203ENST00000554873 COBLL1Q53SF7 1204 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 FOXB2Q5VYV0 432 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 KRT25Q7Z3Z0 450 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 LONP2Q86WA8 852 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 ZNF444Q8N0Y2 327 aaPredicted RBP16.92■□□□□ 0.3
SYNE3-203ENST00000554873 PIGOQ8TEQ8 1089 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 FAM192AQ9GZU8 254 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 CTTNBP2NLQ9P2B4 639 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 SMCO2A6NFE2 343 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 DAPK3O43293 454 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 SLC10A5Q5PT55 438 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 NLRP3Q96P20 1036 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 GALNT8Q9NY28 637 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 SSU72P8A0A1W2PR75 194 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 CD151P48509 253 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 NAB2Q15742 525 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 PARP6Q2NL67 630 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 RRAGAQ7L523 313 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 NEK8Q86SG6 692 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 ENDOVQ8N8Q3 282 aaKnown RBP16.91■□□□□ 0.3
SYNE3-203ENST00000554873 PHC3Q8NDX5 983 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 VCX3BQ9H321 246 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 TMEM165Q9HC07 324 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 VCX3AQ9NNX9 186 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 PACSIN2Q9UNF0 486 aaPredicted RBP16.91■□□□□ 0.3
SYNE3-203ENST00000554873 ARL2BPQ9Y2Y0 163 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 MYMKA6NI61 221 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 RBAK-RBAKDNI3L0D1 243 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 ATP6V1G1O75348 118 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 GJB6O95452 261 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 DDB1Q16531 1140 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 SMIM5Q71RC9 77 aa16.91■□□□□ 0.3
SYNE3-203ENST00000554873 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
SYNE3-203ENST00000554873 LUC7LQ9NQ29 371 aaKnown RBP16.91■□□□□ 0.3
SYNE3-203ENST00000554873 LRRC53A6NM62 1247 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 CCDC169A6NNP5 214 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 NUDT17P0C025 328 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 GRB10Q13322 594 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 SV2BQ7L1I2 683 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 TMC4Q7Z404 712 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 RBBP8NLQ8NC74 664 aaPredicted RBP16.9■□□□□ 0.3
SYNE3-203ENST00000554873 TBC1D16Q8TBP0 767 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 DYDC1Q8WWB3 177 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 CALML4Q96GE6 196 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 OCEL1Q9H607 264 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 FAM114A2Q9NRY5 505 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 BLOC1S4Q9NUP1 217 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 TXKP42681 527 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 IFNAR2P48551 515 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 KIAA0825Q8IV33 1275 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 FITM2Q8N6M3 262 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 SLC17A8Q8NDX2 589 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 ACTRT1Q8TDG2 376 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 TBCKQ8TEA7 893 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 BAP1Q92560 729 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 UTP4Q969X6 686 aaKnown RBP16.9■□□□□ 0.3
SYNE3-203ENST00000554873 LZTS2Q9BRK4 669 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 TXLNGYQ9BZA5 131 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 PREBQ9HCU5 417 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 C6orf50Q9HD87 102 aa16.9■□□□□ 0.3
SYNE3-203ENST00000554873 UNC5CO95185 931 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 GSTT1P30711 240 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 PTDSS1P48651 473 aaKnown RBP16.89■□□□□ 0.29
SYNE3-203ENST00000554873 MAN2A1Q16706 1144 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 TBC1D9BQ66K14 1250 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 SPTY2D1Q68D10 685 aaPredicted RBP16.89■□□□□ 0.29
SYNE3-203ENST00000554873 DYMQ7RTS9 669 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 SEC14L1Q92503 715 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 ANKRD2Q9GZV1 360 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 ETNK1Q9HBU6 452 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 ZNF510Q9Y2H8 683 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 LRCH1Q9Y2L9 728 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 ATP8A1Q9Y2Q0 1164 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 SMAPO00193 183 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 KCNK3O14649 394 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 RGS16O15492 202 aaPredicted RBP16.89■□□□□ 0.29
SYNE3-203ENST00000554873 AGTP01019 485 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 RASA1P20936 1047 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 MUM1Q2TAK8 710 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 CCDC84Q86UT8 332 aaPredicted RBP16.89■□□□□ 0.29
SYNE3-203ENST00000554873 CCDC24Q8N4L8 307 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 TGFBRAP1Q8WUH2 860 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 UCMAQ8WVF2 138 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 PTPRN2Q92932 1015 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 PNMA5Q96PV4 448 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 NUDCD1Q96RS6 583 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 TIPINQ9BVW5 301 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 SPZ1Q9BXG8 430 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 VAT1LQ9HCJ6 419 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 BIN2Q9UBW5 565 aaPredicted RBP16.89■□□□□ 0.29
SYNE3-203ENST00000554873 GMEB1Q9Y692 573 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 CASZ1Q86V15 1759 aa16.89■□□□□ 0.29
SYNE3-203ENST00000554873 CCDC188H7C350 402 aa16.88■□□□□ 0.29
SYNE3-203ENST00000554873 GNA11P29992 359 aa16.88■□□□□ 0.29
SYNE3-203ENST00000554873 NT5C2P49902 561 aa16.88■□□□□ 0.29
SYNE3-203ENST00000554873 RPS6KA1Q15418 735 aa16.88■□□□□ 0.29
SYNE3-203ENST00000554873 USP17L2Q6R6M4 530 aa16.88■□□□□ 0.29
SYNE3-203ENST00000554873 UNC13DQ70J99 1090 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms