RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 H2AFYO75367 372 aaKnown RBP5.6□□□□□ -1.51
SCFD1-214ENST00000554819 SYN1P17600 705 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 MRE11P49959 708 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 STAT5BP51692 787 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 PLP2Q04941 152 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 PCOLCEQ15113 449 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 ZNF827Q17R98 1081 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 AGBL4Q5VU57 503 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 KLHDC10Q6PID8 442 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 GLB1LQ6UWU2 654 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 LARP4Q71RC2 724 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCFD1-214ENST00000554819 OR5AN1Q8NGI8 311 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 LPPQ93052 612 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 FERMT2Q96AC1 680 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 ZNF496Q96IT1 587 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-214ENST00000554819 PITHD1Q9GZP4 211 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-214ENST00000554819 WNT8AQ9H1J5 351 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 OR10A2Q9H208 303 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 MCM8Q9UJA3 840 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 PTPN22Q9Y2R2 807 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 A0A0A6YYJ9 748 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 CNOT4O95628 575 aaKnown RBP5.59□□□□□ -1.51
SCFD1-214ENST00000554819 EYA4O95677 639 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 ID4P47928 161 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 RAC3P60763 192 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 NFYCQ13952 458 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 RNF219Q5W0B1 726 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-214ENST00000554819 IQSEC1Q6DN90 963 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 HDGFL2Q7Z4V5 671 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-214ENST00000554819 BCL6BQ8N143 479 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-214ENST00000554819 ATL2Q8NHH9 583 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 WDR66Q8TBY9 1149 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 DYDC2Q96IM9 177 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 HIST1H2AHQ96KK5 128 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 HIST1H2AJQ99878 128 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 BDH2Q9BUT1 245 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 MTG2Q9H4K7 406 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 DENND2AQ9ULE3 1009 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 FAM184BQ9ULE4 1060 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 NR2E1Q9Y466 385 aa5.59□□□□□ -1.51
SCFD1-214ENST00000554819 MYPNQ86TC9 1320 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 ELL2O00472 640 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-214ENST00000554819 ARHGAP6O43182 974 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 DAPK3O43293 454 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 KDM1AO60341 852 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 OPHN1O60890 802 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 ITGB3P05106 788 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 CELA3BP08861 270 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 ANTXR2P58335 489 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 STAT4Q14765 748 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 MAN2A1Q16706 1144 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 UNQ6494/PRO21346Q6UXR6 183 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 RSAD2Q8WXG1 361 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 WDR92Q96MX6 357 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 LMF1Q96S06 567 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 NOL10Q9BSC4 688 aaKnown RBP5.58□□□□□ -1.52
SCFD1-214ENST00000554819 HAPLN2Q9GZV7 340 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 KIAA1683Q9H0B3 1180 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 SEMA4AQ9H3S1 761 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 MSL2Q9HCI7 577 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 POLR3BQ9NW08 1133 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-214ENST00000554819 PUF60Q9UHX1 559 aaKnown RBP5.58□□□□□ -1.52
SCFD1-214ENST00000554819 NUMBLQ9Y6R0 609 aa5.58□□□□□ -1.52
SCFD1-214ENST00000554819 XPAP23025 273 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-214ENST00000554819 TMPRSS15P98073 1019 aa5.57□□□□□ -1.52
SCFD1-214ENST00000554819 ADAM15Q13444 863 aa5.57□□□□□ -1.52
SCFD1-214ENST00000554819 RNF151Q2KHN1 245 aa5.57□□□□□ -1.52
SCFD1-214ENST00000554819 ZNF662Q6ZS27 426 aa5.57□□□□□ -1.52
SCFD1-214ENST00000554819 CXorf67Q86X51 503 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-214ENST00000554819 SPATS2Q86XZ4 545 aaKnown RBP5.57□□□□□ -1.52
SCFD1-214ENST00000554819 CDYL2Q8N8U2 506 aa5.57□□□□□ -1.52
SCFD1-214ENST00000554819 NEIL1Q96FI4 390 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-214ENST00000554819 RBM15Q96T37 977 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCFD1-214ENST00000554819 OSBPL6Q9BZF3 934 aa5.57□□□□□ -1.52
SCFD1-214ENST00000554819 PPP4R1LQ9P1A2 415 aa5.57□□□□□ -1.52
SCFD1-214ENST00000554819 MAGEL2Q9UJ55 1249 aa5.57□□□□□ -1.52
SCFD1-214ENST00000554819 PRSS38A1L453 326 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 K7ESM1 405 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 GPR39O43194 453 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 FSBPO95073 299 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 PCDH8O95206 1070 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 CR2P20023 1033 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 GPR15P49685 360 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 CCDC178Q5BJE1 867 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 ZBTB41Q5SVQ8 909 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 CIR1Q86X95 450 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-214ENST00000554819 CLRN3Q8NCR9 226 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 GCDHQ92947 438 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-214ENST00000554819 NKD2Q969F2 451 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-214ENST00000554819 SLC7A6OSQ96CW6 309 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-214ENST00000554819 ACAP3Q96P50 834 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 ANO3Q9BYT9 981 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 C12orf65Q9H3J6 166 aaKnown RBP5.56□□□□□ -1.52
SCFD1-214ENST00000554819 MS4A5Q9H3V2 200 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 ATP8A1Q9Y2Q0 1164 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 CTDP1Q9Y5B0 961 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-214ENST00000554819 PCDHB6Q9Y5E3 794 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 SHROOM4Q9ULL8 1493 aa5.56□□□□□ -1.52
SCFD1-214ENST00000554819 LCHNA4D1U4 455 aa5.55□□□□□ -1.52
SCFD1-214ENST00000554819 PMS2P1A4D2B8 440 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms