RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 GANQ9H2C0 597 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 ZC3H4Q9UPT8 1303 aaKnown RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 RGS16O15492 202 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 ECM2O94769 699 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 FTLP02792 175 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 SLC12A3P55017 1021 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 RINT1Q6NUQ1 792 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 KAT2BQ92831 832 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 METTL14Q9HCE5 456 aaKnown RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 BAIAP2L1Q9UHR4 511 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 EMSYQ7Z589 1322 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 FOXN3O00409 490 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 MEIS2O14770 477 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 IL1R1P14778 569 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 FERP16591 822 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 MARCKSL1P49006 195 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 ZCWPW2Q504Y3 356 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 ZNF713Q8N859 430 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 SLC35C1Q96A29 364 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 C18orf8Q96DM3 657 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 INTS2Q9H0H0 1204 aaKnown RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 CD248Q9HCU0 757 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 EIF2AK2P19525 551 aaKnown RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 NF2P35240 595 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 PTGISQ16647 500 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 GLE1Q53GS7 698 aaKnown RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 MIER3Q7Z3K6 550 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 IRF2BP2Q7Z5L9 587 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 CPNE8Q86YQ8 564 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 SYCE1Q8N0S2 351 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 MYCBPAPQ8TBZ2 947 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 HEMGNQ9BXL5 484 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 AZI2Q9H6S1 392 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 TESPA1A2RU30 521 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 FOXO6A8MYZ6 492 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 PJA2O43164 708 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 POLR2MP0CAP2 368 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 RPA1P27694 616 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 STAT2P52630 851 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 ASTE1Q2TB18 679 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 SEL1L2Q5TEA6 688 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 APOBEC3HQ6NTF7 200 aaKnown RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 STXBP4Q6ZWJ1 553 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 RPUSD2Q8IZ73 545 aaKnown RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 CACNA2D3Q8IZS8 1091 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 GDAP1Q8TB36 358 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 PBKQ96KB5 322 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 LXNQ9BS40 222 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 DBR1Q9UK59 544 aaKnown RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-208ENST00000554811 IGSF9BQ9UPX0 1349 aa12.84□□□□□ -0.35
XRCC3-208ENST00000554811 SLC16A4O15374 487 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 SPATA31C1P0DKV0 1188 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 PRLRP16471 622 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 FMO5P49326 533 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 PEX3P56589 373 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 DLG4P78352 724 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 DAB2IPQ5VWQ8 1189 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 C1orf54Q8WWF1 131 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 TCP11Q8WWU5 503 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 CCDC17Q96LX7 622 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 POP1Q99575 1024 aaKnown RBP12.83□□□□□ -0.36
XRCC3-208ENST00000554811 EPN3Q9H201 632 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 DNAJC18Q9H819 358 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 RNF14Q9UBS8 474 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 EIF4E1BA6NMX2 242 aaKnown RBP12.83□□□□□ -0.36
XRCC3-208ENST00000554811 CLTAP09496 248 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 ARP10275 920 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 SOX5P35711 763 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 SOX10P56693 466 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 GRIPAP1Q4V328 841 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 SYT2Q8N9I0 419 aaPredicted RBP12.83□□□□□ -0.36
XRCC3-208ENST00000554811 BZW2Q9Y6E2 419 aaKnown RBP12.83□□□□□ -0.36
XRCC3-208ENST00000554811 ANKRD36CQ5JPF3 1778 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 GRIN2DO15399 1336 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 HMGB1P1B2RPK0 211 aaPredicted RBP12.83□□□□□ -0.36
XRCC3-208ENST00000554811 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 HIP1RO75146 1068 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 CAND2O75155 1236 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 RPSAP08865 295 aaKnown RBP12.83□□□□□ -0.36
XRCC3-208ENST00000554811 HNRNPH1P31943 449 aaKnown RBP12.83□□□□□ -0.36
XRCC3-208ENST00000554811 FRMD5Q7Z6J6 570 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 KRT35Q92764 455 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 ZNF653Q96CK0 615 aa12.83□□□□□ -0.36
XRCC3-208ENST00000554811 NAP1L4Q99733 375 aaKnown RBP12.83□□□□□ -0.36
XRCC3-208ENST00000554811 ELAC2Q9BQ52 826 aaKnown RBP12.83□□□□□ -0.36
XRCC3-208ENST00000554811 ASTN1O14525 1302 aa12.82□□□□□ -0.36
XRCC3-208ENST00000554811 MEFVO15553 781 aaPredicted RBP12.82□□□□□ -0.36
XRCC3-208ENST00000554811 CYP26A1O43174 497 aa12.82□□□□□ -0.36
XRCC3-208ENST00000554811 SHBGP04278 402 aa12.82□□□□□ -0.36
XRCC3-208ENST00000554811 ZNF844Q08AG5 666 aa12.82□□□□□ -0.36
XRCC3-208ENST00000554811 PASD1Q8IV76 773 aa12.82□□□□□ -0.36
XRCC3-208ENST00000554811 ZSWIM2Q8NEG5 633 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms