RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 ALADP13716 330 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 MRE11P49959 708 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 CCL23P55773 120 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 CYP27A1Q02318 531 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 ICA1Q05084 483 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 ITGA7Q13683 1181 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 CCDC144BQ3MJ40 725 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 FAM9BQ8IZU0 186 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 PHOSPHO2Q8TCD6 241 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 CCDC17Q96LX7 622 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 FBXL18Q96ME1 805 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 RIOK1Q9BRS2 568 aaKnown RBP5.8□□□□□ -1.48
ATXN3-229ENST00000554672 TEX13BQ9BXU2 312 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 BCO2Q9BYV7 579 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 CRNKL1Q9BZJ0 848 aaKnown RBP5.8□□□□□ -1.48
ATXN3-229ENST00000554672 KCNH6Q9H252 994 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 ZNF214Q9UL59 606 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-229ENST00000554672 U3KQE9 123 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 MAST2Q6P0Q8 1798 aa5.8□□□□□ -1.48
ATXN3-229ENST00000554672 LTBP2Q14767 1821 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 PNMA6EA0A0J9YXQ4 647 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 CTAGE5O15320 804 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 ANP32CO43423 234 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 CA3P07451 260 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 SUPT20HL2P0C7V6 817 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 ACTN1P12814 892 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 ID3Q02535 119 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 TNFAIP2Q03169 654 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 CDK5R2Q13319 367 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 OS9Q13438 667 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-229ENST00000554672 CXCL17Q6UXB2 119 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 DTHD1Q6ZMT9 781 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 NOL8Q76FK4 1167 aaKnown RBP5.79□□□□□ -1.48
ATXN3-229ENST00000554672 SPRED2Q7Z698 418 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 TP53INP2Q8IXH6 220 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 REPS2Q8NFH8 660 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 ARNTL2Q8WYA1 636 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 NOC4LQ9BVI4 516 aaKnown RBP5.79□□□□□ -1.48
ATXN3-229ENST00000554672 TRPV6Q9H1D0 765 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 KANSL2Q9H9L4 492 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 CERS4Q9HA82 394 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 CD320Q9NPF0 282 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 KRT82Q9NSB4 513 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 FBXO28Q9NVF7 368 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 LMCD1Q9NZU5 365 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 GNEQ9Y223 722 aaKnown RBP5.79□□□□□ -1.48
ATXN3-229ENST00000554672 MYH2Q9UKX2 1941 aa5.79□□□□□ -1.48
ATXN3-229ENST00000554672 UMODL1Q5DID0 1318 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 RLFQ13129 1914 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 ATP2A1O14983 1001 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 ZBED4O75132 1171 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 SURF6O75683 361 aaKnown RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 SLFN14P0C7P3 912 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 EEF2P13639 858 aaKnown RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 AKR1B1P15121 316 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 ITGB5P18084 799 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 ATP8B2P98198 1209 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 BEX3Q00994 111 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 TAP1Q03518 808 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 GRB10Q13322 594 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 TTLL4Q14679 1199 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 FSCN1Q16658 493 aaKnown RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 KRT40Q6A162 431 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 SNRNP48Q6IEG0 339 aaKnown RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 NXPE4Q6UWF7 544 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 ARMCX2Q7L311 632 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 FAM178BQ8IXR5 827 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 ANKRD35Q8N283 1001 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 PRPF38AQ8NAV1 312 aaKnown RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 BCL7CQ8WUZ0 217 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 VWCEQ96DN2 955 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 DYNLL2Q96FJ2 89 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 UIMC1Q96RL1 719 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 SLC9A7Q96T83 725 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 SLF1Q9BQI6 1058 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 AP5M1Q9H0R1 490 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 CCDC8Q9H0W5 538 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 WNT8AQ9H1J5 351 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 ANTXR1Q9H6X2 564 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 DCP1AQ9NPI6 582 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 FBXO40Q9UH90 709 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 DBNLQ9UJU6 430 aaKnown RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 Q9Y3F1 56 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 RIPK3Q9Y572 518 aa5.78□□□□□ -1.48
ATXN3-229ENST00000554672 CTDP1Q9Y5B0 961 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 ARID1BQ8NFD5 2236 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-229ENST00000554672 GRIN2DO15399 1336 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-229ENST00000554672 EPOPA6NHQ4 379 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 ASB14A6NK59 587 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 IPO8O15397 1037 aaKnown RBP5.77□□□□□ -1.49
ATXN3-229ENST00000554672 TREHO43280 583 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 ADCY6O43306 1168 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 B4GALT4O60513 344 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 LEFTY1O75610 366 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 FAM87AP0C7U9 286 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 CYP2D6P10635 497 aa5.77□□□□□ -1.49
ATXN3-229ENST00000554672 RFC2P35250 354 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms