RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 BARHL2Q9NY43 387 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 STOML1Q9UBI4 398 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 SFI1A8K8P3 1242 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 KRT38O76015 456 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 CYP2D6P10635 497 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 PRELPP51888 382 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 TMPRSS15P98073 1019 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 ZBTB33Q86T24 672 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 FAF2Q96CS3 445 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 COA1Q9GZY4 146 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 HECW2Q9P2P5 1572 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 K7ERI5 159 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.92□□□□□ -0.02
VTI1B-204ENST00000554659 LRRC4Q9HBW1 653 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 MAGED2Q9UNF1 606 aaPredicted RBP14.92□□□□□ -0.02
VTI1B-204ENST00000554659 PNPLA6Q8IY17 1366 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 A0A1B0GTH6 734 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 CFAP73A6NFT4 308 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 E9PMD0 336 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 NVLO15381 856 aaKnown RBP14.92□□□□□ -0.02
VTI1B-204ENST00000554659 GGPS1O95749 300 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 MDM2Q00987 491 aaPredicted RBP14.92□□□□□ -0.02
VTI1B-204ENST00000554659 E4F1Q66K89 784 aaPredicted RBP14.92□□□□□ -0.02
VTI1B-204ENST00000554659 PDXDC1Q6P996 788 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 TTC17Q96AE7 1141 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 CEP19Q96LK0 163 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 DBNDD1Q9H9R9 158 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 ZFP69BQ9UJL9 534 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 LRRC7Q96NW7 1537 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 ESYT3A0FGR9 886 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 H0Y3Z8 333 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 NAALADL2Q58DX5 795 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 RSRC2Q7L4I2 434 aaKnown RBP14.92□□□□□ -0.02
VTI1B-204ENST00000554659 HEXIM2Q96MH2 286 aaKnown RBP14.92□□□□□ -0.02
VTI1B-204ENST00000554659 DDX47Q9H0S4 455 aaKnown RBP14.92□□□□□ -0.02
VTI1B-204ENST00000554659 UPF3AQ9H1J1 476 aaKnown RBP14.92□□□□□ -0.02
VTI1B-204ENST00000554659 ZWILCHQ9H900 591 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 SEL1LQ9UBV2 794 aa14.92□□□□□ -0.02
VTI1B-204ENST00000554659 FBXO2Q9UK22 296 aaPredicted RBP14.92□□□□□ -0.02
VTI1B-204ENST00000554659 TFDP2Q14188 446 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 FAM47EQ6ZV65 393 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 ZC3H18Q86VM9 953 aaKnown RBP14.91□□□□□ -0.02
VTI1B-204ENST00000554659 TMEM35BQ8NCS4 154 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 SPATA4Q8NEY3 305 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 PIGOQ8TEQ8 1089 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.91□□□□□ -0.02
VTI1B-204ENST00000554659 SCHIP1Q9P0W5 487 aaPredicted RBP14.91□□□□□ -0.02
VTI1B-204ENST00000554659 PPARGC1AQ9UBK2 798 aaKnown RBP14.91□□□□□ -0.02
VTI1B-204ENST00000554659 PFASO15067 1338 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 CALB1P05937 261 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 VSNL1P62760 191 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 RPF1Q9H9Y2 349 aaKnown RBP14.91□□□□□ -0.02
VTI1B-204ENST00000554659 DCP1AQ9NPI6 582 aaPredicted RBP14.91□□□□□ -0.02
VTI1B-204ENST00000554659 NOC2LQ9Y3T9 749 aaKnown RBP14.91□□□□□ -0.02
VTI1B-204ENST00000554659 ABCC3O15438 1527 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 ITIH6Q6UXX5 1313 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 FOXN1O15353 648 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 DHX34Q14147 1143 aaKnown RBP14.91□□□□□ -0.02
VTI1B-204ENST00000554659 PDXDC2PQ6P474 469 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 METTL23Q86XA0 190 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 C7orf31Q8N865 590 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 ZNF564Q8TBZ8 553 aaPredicted RBP14.91□□□□□ -0.02
VTI1B-204ENST00000554659 SLC4A7Q9Y6M7 1214 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 HSPA4LO95757 839 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 CCNA1P78396 465 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 HLFQ16534 295 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 SPOUT1Q5T280 376 aaKnown RBP14.91□□□□□ -0.02
VTI1B-204ENST00000554659 FAM196AQ6ZSG2 479 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 SAAL1Q96ER3 474 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 WNT8AQ9H1J5 351 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 SLC24A3Q9HC58 644 aa14.91□□□□□ -0.02
VTI1B-204ENST00000554659 SIX6OS1Q8N1H7 587 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 FSCBQ5H9T9 825 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 MCPH1Q8NEM0 835 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 DPF2Q92785 391 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 GSG1L2A8MUP6 293 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 HAUS5O94927 633 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 GCLMP48507 274 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 SCARA5Q6ZMJ2 495 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 HSPH1Q92598 858 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 SEPT8Q92599 483 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 THOC1Q96FV9 657 aaKnown RBP14.9□□□□□ -0.02
VTI1B-204ENST00000554659 LRRC37BQ96QE4 947 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 POLR3CQ9BUI4 534 aaPredicted RBP14.9□□□□□ -0.02
VTI1B-204ENST00000554659 TRIM15Q9C019 465 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 STRIP2Q9ULQ0 834 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 SNX12Q9UMY4 172 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 APOBEC2Q9Y235 224 aaKnown RBP14.9□□□□□ -0.02
VTI1B-204ENST00000554659 BRAFP15056 766 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 DRP2Q13474 957 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 KLC3Q6P597 504 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 ARMCX2Q7L311 632 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 RFFLQ8WZ73 363 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 ANKRD7Q92527 254 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 DYDC2Q96IM9 177 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 NUP85Q9BW27 656 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 YIPF3Q9GZM5 350 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 INTS2Q9H0H0 1204 aaKnown RBP14.9□□□□□ -0.02
VTI1B-204ENST00000554659 PNPLA7Q6ZV29 1317 aa14.9□□□□□ -0.02
VTI1B-204ENST00000554659 SPDYE2BA6NHP3 402 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms