RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 HLA-CQ95604 372 aa9.78□□□□□ -0.84
ACTN1-213ENST00000554508 TBC1D32Q96NH3 1257 aa9.78□□□□□ -0.84
ACTN1-213ENST00000554508 CEP89Q96ST8 783 aa9.78□□□□□ -0.84
ACTN1-213ENST00000554508 PPP1R16BQ96T49 567 aa9.78□□□□□ -0.84
ACTN1-213ENST00000554508 C11orf84Q9BUA3 381 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-213ENST00000554508 INO80BQ9C086 356 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-213ENST00000554508 LMAN2LQ9H0V9 348 aa9.78□□□□□ -0.84
ACTN1-213ENST00000554508 ELAC1Q9H777 363 aaKnown RBP9.78□□□□□ -0.84
ACTN1-213ENST00000554508 CYP26B1Q9NR63 512 aa9.78□□□□□ -0.84
ACTN1-213ENST00000554508 PCDHA12Q9UN75 941 aa9.78□□□□□ -0.84
ACTN1-213ENST00000554508 ATG2AQ2TAZ0 1938 aa9.78□□□□□ -0.84
ACTN1-213ENST00000554508 VCANP13611 3396 aa9.77□□□□□ -0.84
ACTN1-213ENST00000554508 TTC28Q96AY4 2481 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 FAM205CA6NFA0 338 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 LINC00271P0C7V0 271 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 DARSP14868 501 aaKnown RBP9.77□□□□□ -0.85
ACTN1-213ENST00000554508 SPIRE1Q08AE8 756 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 ORC2Q13416 577 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-213ENST00000554508 RABEP1Q15276 862 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 CALCRLQ16602 461 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 TIGD5Q53EQ6 642 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 NCAPH2Q6IBW4 605 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 ZNF410Q86VK4 478 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 FAM184AQ8NB25 1140 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 NLRP7Q8WX94 980 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 C8orf76Q96K31 380 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 SCLT1Q96NL6 688 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 LXNQ9BS40 222 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 GCOM2Q9BZD3 368 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-213ENST00000554508 FOXP1Q9H334 677 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-213ENST00000554508 ZSWIM4Q9H7M6 989 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 ATP6V0A4Q9HBG4 840 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 CHST12Q9NRB3 414 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 TMEM161AQ9NX61 479 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 SUCLA2Q9P2R7 463 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-213ENST00000554508 REV3LO60673 3130 aa9.77□□□□□ -0.85
ACTN1-213ENST00000554508 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-213ENST00000554508 TMEM150BA6NC51 233 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 ASAP2O43150 1006 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 HOXA2O43364 376 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 NCK2O43639 380 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 GAS2O43903 313 aaKnown RBP9.76□□□□□ -0.85
ACTN1-213ENST00000554508 ST18O60284 1047 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 NEMFO60524 1076 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 SLITRK3O94933 977 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 BMP1P13497 986 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 YWHABP31946 246 aaKnown RBP9.76□□□□□ -0.85
ACTN1-213ENST00000554508 RFC5P40937 340 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 FOSBP53539 338 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 POLGP54098 1239 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-213ENST00000554508 GUCY1B3Q02153 619 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 DRP2Q13474 957 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 RHPN2Q8IUC4 686 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 FBXO18Q8NFZ0 1043 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 NEK9Q8TD19 979 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 SLC7A3Q8WY07 619 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 DYDC2Q96IM9 177 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 CEP170P1Q96L14 293 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 MTMR9Q96QG7 549 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 EIF2AK1Q9BQI3 630 aaKnown RBP9.76□□□□□ -0.85
ACTN1-213ENST00000554508 NSUN3Q9H649 340 aaKnown RBP9.76□□□□□ -0.85
ACTN1-213ENST00000554508 DHX33Q9H6R0 707 aaKnown RBP9.76□□□□□ -0.85
ACTN1-213ENST00000554508 TTC12Q9H892 705 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-213ENST00000554508 AAASQ9NRG9 546 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 DACT1Q9NYF0 836 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 RGL1Q9NZL6 768 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 MRPL42Q9Y6G3 142 aaKnown RBP9.76□□□□□ -0.85
ACTN1-213ENST00000554508 PLXNA4Q9HCM2 1894 aa9.76□□□□□ -0.85
ACTN1-213ENST00000554508 A0A087WZ62 844 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 GRM6O15303 877 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 LYPLA2O95372 231 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 EOMESO95936 686 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 XRCC6P12956 609 aaKnown RBP eCLIP9.75□□□□□ -0.85
ACTN1-213ENST00000554508 SFPQP23246 707 aaKnown RBP eCLIP9.75□□□□□ -0.85
ACTN1-213ENST00000554508 TXKP42681 527 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 NPEPPSP55786 919 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 TFF2Q03403 129 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 CTTNQ14247 550 aaKnown RBP9.75□□□□□ -0.85
ACTN1-213ENST00000554508 PAN2Q504Q3 1202 aaKnown RBP9.75□□□□□ -0.85
ACTN1-213ENST00000554508 XKR9Q5GH70 373 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 FAM102BQ5T8I3 360 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 PLA2G4FQ68DD2 849 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 TPH2Q8IWU9 490 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 TCP11Q8WWU5 503 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 ZNF668Q96K58 619 aaPredicted RBP9.75□□□□□ -0.85
ACTN1-213ENST00000554508 HSD17B14Q9BPX1 270 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 SH2D3AQ9BRG2 576 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 FDXACB1Q9BRP7 624 aaPredicted RBP9.75□□□□□ -0.85
ACTN1-213ENST00000554508 TRAIPQ9BWF2 469 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 UBE2ZQ9H832 354 aaPredicted RBP9.75□□□□□ -0.85
ACTN1-213ENST00000554508 ANKEF1Q9NU02 776 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 WRAP73Q9P2S5 460 aaPredicted RBP9.75□□□□□ -0.85
ACTN1-213ENST00000554508 PLAGL2Q9UPG8 496 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 KIF3AQ9Y496 699 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 PCDHB12Q9Y5F1 795 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 COL4A3BPQ9Y5P4 624 aa9.75□□□□□ -0.85
ACTN1-213ENST00000554508 A0A0U1RQF3 1178 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 TBKBP1A7MCY6 615 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 TNFRSF10AO00220 468 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 SKIP12755 728 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms