RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 MIGA1Q8NAN2 632 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 CTAGE1Q96RT6 745 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 NCAPGQ9BPX3 1015 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 CRACR2AQ9BSW2 395 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 LRRC1Q9BTT6 524 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 TUBB2BQ9BVA1 445 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 FAM126AQ9BYI3 521 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 NAPBQ9H115 298 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 VIPAS39Q9H9C1 493 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 AATFQ9NY61 560 aaKnown RBP eCLIP2.84□□□□□ -1.952e-7■■■■■ 32.8
PRPF39-207ENST00000554439 ARHGAP23Q9P227 1491 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 LIMA1Q9UHB6 759 aaKnown RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 POLR3KQ9Y2Y1 108 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 RIPOR2Q9Y4F9 1068 aa2.84□□□□□ -1.95
PRPF39-207ENST00000554439 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.84□□□□□ -1.95
PRPF39-207ENST00000554439 NUP188Q5SRE5 1749 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 PHRF1Q9P1Y6 1649 aaKnown RBP2.84□□□□□ -1.96
PRPF39-207ENST00000554439 ITIH6Q6UXX5 1313 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MAP3K15Q6ZN16 1313 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 STK36Q9NRP7 1315 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 LRRC10BA6NIK2 292 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 GSG1L2A8MUP6 293 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 B2RBV5 119 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 B4DLN1 442 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF263O14978 683 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 ATXN7O15265 892 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-207ENST00000554439 NCK2O43639 380 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 DEXIO95424 95 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 KRT14P02533 472 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 PDGFRBP09619 1106 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MAPTP10636 758 aaKnown RBP2.84□□□□□ -1.96
PRPF39-207ENST00000554439 IDEP14735 1019 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 ELNP15502 786 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MCM7P33993 719 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 ZNF157P51786 506 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-207ENST00000554439 EIF5P55010 431 aaKnown RBP2.84□□□□□ -1.96
PRPF39-207ENST00000554439 APBA1Q02410 837 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 PLAURQ03405 335 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 PAK1Q13153 545 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MAP9Q49MG5 647 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 AKNAD1Q5T1N1 836 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 PAPD7Q5XG87 772 aaKnown RBP2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MCTP2Q6DN12 878 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MFSD6Q6ZSS7 791 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 C16orf86Q6ZW13 317 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 KRT28Q7Z3Y7 464 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 KIAA1328Q86T90 577 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 LCORLQ8N3X6 602 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MB21D1Q8N884 522 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 FANCBQ8NB91 859 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 OR8K1Q8NGG5 319 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 TTLL11Q8NHH1 800 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 CTCFLQ8NI51 663 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-207ENST00000554439 GRIN3AQ8TCU5 1115 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 CCDC51Q96ER9 411 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 GSDMAQ96QA5 445 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MYCBPQ99417 103 aaPredicted RBP2.84□□□□□ -1.96
PRPF39-207ENST00000554439 CAPS2Q9BXY5 557 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MIR1-1HGQ9H1L0 117 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 EHMT1Q9H9B1 1298 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MLXIPQ9HAP2 919 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 CNNM1Q9NRU3 951 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MYO1AQ9UBC5 1043 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 CAPN6Q9Y6Q1 641 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 SLC4A4Q9Y6R1 1079 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 MYH2Q9UKX2 1941 aa2.84□□□□□ -1.96
PRPF39-207ENST00000554439 BCL9LQ86UU0 1499 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 TMEM94Q12767 1356 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CYP2D7A0A087X1C5 515 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ZSCAN5CA6NGD5 496 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PP2D1A8MPX8 630 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 UPK3BL1B0FP48 263 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 UPK3BL2E5RIL1 263 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 EBAG9O00559 213 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 EIF3HO15372 352 aaKnown RBP eCLIP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 BNIP3LO60238 219 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ZEB2O60315 1214 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 RPN1P04843 607 aaKnown RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PSAPP07602 524 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 TDO2P48775 406 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 DNA2P51530 1060 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 HYAL2Q12891 473 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 TRADDQ15628 312 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 NPY5RQ15761 445 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 HLFQ16534 295 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CT47A1Q5JQC4 288 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 NFRKBQ6P4R8 1299 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 GK5Q6ZS86 529 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PIK3AP1Q6ZUJ8 805 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 CREG2Q8IUH2 290 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ANKRD18AQ8IVF6 992 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 SUGP1Q8IWZ8 645 aaKnown RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 PGBD3Q8N328 593 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 ANKRD13CQ8N6S4 541 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 VGLL2Q8N8G2 317 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 OR6P1Q8NGX9 317 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 LRRC15Q8TF66 581 aa2.83□□□□□ -1.96
PRPF39-207ENST00000554439 AENQ8WTP8 325 aaKnown RBP2.83□□□□□ -1.96
PRPF39-207ENST00000554439 SDR42E1Q8WUS8 393 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms