RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 EPB41L4AQ9HCS5 686 aaPredicted RBP6.85□□□□□ -1.31
CHD8-207ENST00000554384 DPP7Q9UHL4 492 aa6.85□□□□□ -1.31
CHD8-207ENST00000554384 MYPNQ86TC9 1320 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 KLHL33A6NCF5 533 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 PFKMP08237 780 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 MLLT6P55198 1093 aaPredicted RBP6.84□□□□□ -1.31
CHD8-207ENST00000554384 CDK17Q00537 523 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 MESP2Q0VG99 397 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 SSPNQ14714 243 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 KANK2Q63ZY3 851 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 KRTAP5-3Q6L8H2 238 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 C14orf80Q86SX3 495 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 CHPFQ8IZ52 775 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 TEKT5Q96M29 485 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 TMEM209Q96SK2 561 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 BTBD2Q9BX70 525 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 OR10A5Q9H207 317 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 KCND1Q9NSA2 647 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 CDC42EP3Q9UKI2 254 aa6.84□□□□□ -1.31
CHD8-207ENST00000554384 PF4V1P10720 104 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 C5AR1P21730 350 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 MTNR1BP49286 362 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 SYDE1Q6ZW31 735 aaPredicted RBP6.83□□□□□ -1.32
CHD8-207ENST00000554384 SLC41A1Q8IVJ1 513 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 ADGRG2Q8IZP9 1017 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 CPA6Q8N4T0 437 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 LINC00482Q8N8I6 264 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 KYQ8NBH2 561 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 CALML6Q8TD86 181 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 TSPEARQ8WU66 669 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 CLIC6Q96NY7 704 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 LUC7LQ9NQ29 371 aaKnown RBP6.83□□□□□ -1.32
CHD8-207ENST00000554384 SPATA6Q9NWH7 488 aaPredicted RBP6.83□□□□□ -1.32
CHD8-207ENST00000554384 GPR45Q9Y5Y3 372 aa6.83□□□□□ -1.32
CHD8-207ENST00000554384 SEMA7AO75326 666 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 ZRANB2O95218 330 aaKnown RBP eCLIP6.82□□□□□ -1.32
CHD8-207ENST00000554384 AGXTP21549 392 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 APEX1P27695 318 aaKnown RBP6.82□□□□□ -1.32
CHD8-207ENST00000554384 RECQLP46063 649 aaPredicted RBP6.82□□□□□ -1.32
CHD8-207ENST00000554384 PPARAQ07869 468 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 TCIRG1Q13488 830 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 STILQ15468 1287 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 WDR72Q3MJ13 1102 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 GAREM2Q75VX8 874 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 WDR48Q8TAF3 677 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 PRSS50Q9UI38 385 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 DENND2AQ9ULE3 1009 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 INVSQ9Y283 1065 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 NUMBLQ9Y6R0 609 aa6.82□□□□□ -1.32
CHD8-207ENST00000554384 ST20-MTHFSA0A0A6YYL1 179 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 OPHN1O60890 802 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 KNG1P01042 644 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 KRT1P04264 644 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 COL6A1P12109 1028 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 PI3P19957 117 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 EFCAB2Q5VUJ9 269 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 FAM129CQ86XR2 697 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 CMTR2Q8IYT2 770 aaKnown RBP6.81□□□□□ -1.32
CHD8-207ENST00000554384 BCL6BQ8N143 479 aaPredicted RBP6.81□□□□□ -1.32
CHD8-207ENST00000554384 FNIP1Q8TF40 1166 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 ZNF526Q8TF50 670 aaPredicted RBP6.81□□□□□ -1.32
CHD8-207ENST00000554384 ZCCHC14Q8WYQ9 949 aaKnown RBP6.81□□□□□ -1.32
CHD8-207ENST00000554384 NOL10Q9BSC4 688 aaKnown RBP6.81□□□□□ -1.32
CHD8-207ENST00000554384 ZNF277Q9NRM2 450 aaPredicted RBP6.81□□□□□ -1.32
CHD8-207ENST00000554384 FTSJ1Q9UET6 329 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 EVLQ9UI08 416 aaPredicted RBP6.81□□□□□ -1.32
CHD8-207ENST00000554384 TUBD1Q9UJT1 453 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 ZBTB21Q9ULJ3 1066 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 MRFAP1Q9Y605 127 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 PMF1-BGLAPU3KQ54 211 aa6.81□□□□□ -1.32
CHD8-207ENST00000554384 A0A0A6YYJ9 748 aa6.8□□□□□ -1.32
CHD8-207ENST00000554384 A0A1B0GTL3 188 aa6.8□□□□□ -1.32
CHD8-207ENST00000554384 CT47B1P0C2W7 299 aaPredicted RBP6.8□□□□□ -1.32
CHD8-207ENST00000554384 MUM1Q2TAK8 710 aa6.8□□□□□ -1.32
CHD8-207ENST00000554384 RGL3Q3MIN7 710 aa6.8□□□□□ -1.32
CHD8-207ENST00000554384 TRMT10BQ6PF06 316 aaKnown RBP6.8□□□□□ -1.32
CHD8-207ENST00000554384 ATG14Q6ZNE5 492 aa6.8□□□□□ -1.32
CHD8-207ENST00000554384 NOL8Q76FK4 1167 aaKnown RBP6.8□□□□□ -1.32
CHD8-207ENST00000554384 GAB3Q8WWW8 586 aa6.8□□□□□ -1.32
CHD8-207ENST00000554384 SIGLEC10Q96LC7 697 aa6.8□□□□□ -1.32
CHD8-207ENST00000554384 LRGUKQ96M69 825 aa6.8□□□□□ -1.32
CHD8-207ENST00000554384 PWWP2AQ96N64 755 aa6.8□□□□□ -1.32
CHD8-207ENST00000554384 PITHD1Q9GZP4 211 aaPredicted RBP6.8□□□□□ -1.32
CHD8-207ENST00000554384 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.8□□□□□ -1.32
CHD8-207ENST00000554384 IRAK3Q9Y616 596 aa6.8□□□□□ -1.32
CHD8-207ENST00000554384 A0A0A6YYK5 440 aaPredicted RBP6.79□□□□□ -1.32
CHD8-207ENST00000554384 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
CHD8-207ENST00000554384 DDX3XO00571 662 aaKnown RBP eCLIP6.79□□□□□ -1.32
CHD8-207ENST00000554384 IL33O95760 270 aa6.79□□□□□ -1.32
CHD8-207ENST00000554384 IL13P35225 146 aa6.79□□□□□ -1.32
CHD8-207ENST00000554384 STAT5BP51692 787 aa6.79□□□□□ -1.32
CHD8-207ENST00000554384 BCAR1P56945 870 aa6.79□□□□□ -1.32
CHD8-207ENST00000554384 MRPS9P82933 396 aaKnown RBP6.79□□□□□ -1.32
CHD8-207ENST00000554384 DLX2Q07687 328 aaPredicted RBP6.79□□□□□ -1.32
CHD8-207ENST00000554384 PKN1Q16512 942 aa6.79□□□□□ -1.32
CHD8-207ENST00000554384 PRR31Q5SQ13 230 aa6.79□□□□□ -1.32
CHD8-207ENST00000554384 MYO1HQ8N1T3 1032 aa6.79□□□□□ -1.32
CHD8-207ENST00000554384 TTLL6Q8N841 843 aa6.79□□□□□ -1.32
CHD8-207ENST00000554384 NUDT10Q8NFP7 164 aa6.79□□□□□ -1.32
CHD8-207ENST00000554384 OR5AN1Q8NGI8 311 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms