RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 POLR3CQ9BUI4 534 aaPredicted RBP22.75■■□□□ 1.23
FOXA1-203ENST00000553751 CERS4Q9HA82 394 aa22.75■■□□□ 1.23
FOXA1-203ENST00000553751 RC3H2Q9HBD1 1191 aaKnown RBP22.75■■□□□ 1.23
FOXA1-203ENST00000553751 TUFT1Q9NNX1 390 aa22.75■■□□□ 1.23
FOXA1-203ENST00000553751 BMP2KQ9NSY1 1161 aaPredicted RBP22.75■■□□□ 1.23
FOXA1-203ENST00000553751 ANKEF1Q9NU02 776 aa22.75■■□□□ 1.23
FOXA1-203ENST00000553751 TRANK1O15050 2925 aa22.74■■□□□ 1.23
FOXA1-203ENST00000553751 EPOPA6NHQ4 379 aa22.74■■□□□ 1.23
FOXA1-203ENST00000553751 LAD1O00515 517 aa22.74■■□□□ 1.23
FOXA1-203ENST00000553751 CDC42EP1Q00587 391 aa22.74■■□□□ 1.23
FOXA1-203ENST00000553751 ADGRE1Q14246 886 aa22.74■■□□□ 1.23
FOXA1-203ENST00000553751 RHPN2Q8IUC4 686 aa22.74■■□□□ 1.23
FOXA1-203ENST00000553751 ERMNQ8TAM6 284 aa22.74■■□□□ 1.23
FOXA1-203ENST00000553751 PIGOQ8TEQ8 1089 aa22.74■■□□□ 1.23
FOXA1-203ENST00000553751 YME1L1Q96TA2 773 aa22.74■■□□□ 1.23
FOXA1-203ENST00000553751 PDCP20941 246 aa22.73■■□□□ 1.23
FOXA1-203ENST00000553751 RPA1P27694 616 aa22.73■■□□□ 1.23
FOXA1-203ENST00000553751 PRPHP41219 470 aa22.73■■□□□ 1.23
FOXA1-203ENST00000553751 RARRES1P49788 294 aa22.73■■□□□ 1.23
FOXA1-203ENST00000553751 ZNF410Q86VK4 478 aa22.73■■□□□ 1.23
FOXA1-203ENST00000553751 KSR1Q8IVT5 923 aa22.73■■□□□ 1.23
FOXA1-203ENST00000553751 IGSF22Q8N9C0 903 aa22.73■■□□□ 1.23
FOXA1-203ENST00000553751 TMEM143Q96AN5 459 aa22.73■■□□□ 1.23
FOXA1-203ENST00000553751 GAS2L1Q99501 681 aaPredicted RBP22.73■■□□□ 1.23
FOXA1-203ENST00000553751 XPNPEP1Q9NQW7 623 aa22.73■■□□□ 1.23
FOXA1-203ENST00000553751 COL4A4P53420 1690 aaPredicted RBP22.72■■□□□ 1.23
FOXA1-203ENST00000553751 A0A087WWV3 80 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 A0A087WZ62 844 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 VPS37CA5D8V6 355 aaPredicted RBP22.72■■□□□ 1.23
FOXA1-203ENST00000553751 GAS2O43903 313 aaKnown RBP22.72■■□□□ 1.23
FOXA1-203ENST00000553751 ATP2C1P98194 919 aaPredicted RBP22.72■■□□□ 1.23
FOXA1-203ENST00000553751 PDIA5Q14554 519 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 DSC3Q14574 896 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 IL17AQ16552 155 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 HAUS3Q68CZ6 603 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 POTEGQ6S5H5 508 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 BRAPQ7Z569 592 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 NPAS4Q8IUM7 802 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 ARNTL2Q8WYA1 636 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 MTRQ99707 1265 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 ADAM2Q99965 735 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 FDXACB1Q9BRP7 624 aaPredicted RBP22.72■■□□□ 1.23
FOXA1-203ENST00000553751 GCOM2Q9BZD3 368 aaPredicted RBP22.72■■□□□ 1.23
FOXA1-203ENST00000553751 RGS18Q9NS28 235 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 LRWD1Q9UFC0 647 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 COL4A3BPQ9Y5P4 624 aa22.72■■□□□ 1.23
FOXA1-203ENST00000553751 EYSQ5T1H1 3165 aa22.71■■□□□ 1.23
FOXA1-203ENST00000553751 DENND3A2RUS2 1198 aa22.71■■□□□ 1.23
FOXA1-203ENST00000553751 XRCC6P12956 609 aaKnown RBP eCLIP22.71■■□□□ 1.23
FOXA1-203ENST00000553751 SARSP49591 514 aaKnown RBP22.71■■□□□ 1.23
FOXA1-203ENST00000553751 ERVK-21P61565 698 aa22.71■■□□□ 1.23
FOXA1-203ENST00000553751 PRPF31Q8WWY3 499 aaKnown RBP22.71■■□□□ 1.23
FOXA1-203ENST00000553751 PSPC1Q8WXF1 523 aaKnown RBP22.71■■□□□ 1.23
FOXA1-203ENST00000553751 ZNF689Q96CS4 500 aaPredicted RBP22.71■■□□□ 1.23
FOXA1-203ENST00000553751 NLRP4Q96MN2 994 aa22.71■■□□□ 1.23
FOXA1-203ENST00000553751 CCDC43Q96MW1 224 aaKnown RBP22.71■■□□□ 1.23
FOXA1-203ENST00000553751 TGS1Q96RS0 853 aaKnown RBP22.71■■□□□ 1.23
FOXA1-203ENST00000553751 ATP6V0A4Q9HBG4 840 aa22.71■■□□□ 1.23
FOXA1-203ENST00000553751 C1orf112Q9NSG2 853 aa22.71■■□□□ 1.23
FOXA1-203ENST00000553751 FOXD4L1Q9NU39 408 aa22.71■■□□□ 1.23
FOXA1-203ENST00000553751 ADGRA3Q8IWK6 1321 aa22.71■■□□□ 1.23
FOXA1-203ENST00000553751 C9IYK1 514 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 RFXAPO00287 272 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 CSDE1O75534 798 aaKnown RBP22.7■■□□□ 1.22
FOXA1-203ENST00000553751 DGAT1O75907 488 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 DGKIO75912 1065 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 SYT1P21579 422 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 FGFR4P22455 802 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 SLC24A5Q71RS6 500 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 FERMT3Q86UX7 667 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 MAFAQ8NHW3 353 aaPredicted RBP22.7■■□□□ 1.22
FOXA1-203ENST00000553751 TCP11Q8WWU5 503 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 NACC1Q96RE7 527 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 RAB34Q9BZG1 259 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 IFT122Q9HBG6 1241 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 DBR1Q9UK59 544 aaKnown RBP22.7■■□□□ 1.22
FOXA1-203ENST00000553751 MTUS1Q9ULD2 1270 aa22.7■■□□□ 1.22
FOXA1-203ENST00000553751 MUTP22033 750 aa22.69■■□□□ 1.22
FOXA1-203ENST00000553751 CCT6AP40227 531 aaKnown RBP22.69■■□□□ 1.22
FOXA1-203ENST00000553751 LAMTOR4Q0VGL1 99 aa22.69■■□□□ 1.22
FOXA1-203ENST00000553751 ECM1Q16610 540 aa22.69■■□□□ 1.22
FOXA1-203ENST00000553751 DTHD1Q6ZMT9 781 aa22.69■■□□□ 1.22
FOXA1-203ENST00000553751 C17orf80Q9BSJ5 609 aa22.69■■□□□ 1.22
FOXA1-203ENST00000553751 PP2D1A8MPX8 630 aa22.68■■□□□ 1.22
FOXA1-203ENST00000553751 USO1O60763 962 aaKnown RBP22.68■■□□□ 1.22
FOXA1-203ENST00000553751 STAG3L1P0CL83 205 aa22.68■■□□□ 1.22
FOXA1-203ENST00000553751 SFPQP23246 707 aaKnown RBP eCLIP22.68■■□□□ 1.22
FOXA1-203ENST00000553751 HSCBQ8IWL3 235 aa22.68■■□□□ 1.22
FOXA1-203ENST00000553751 SNX29Q8TEQ0 813 aa22.68■■□□□ 1.22
FOXA1-203ENST00000553751 STK24Q9Y6E0 443 aa22.68■■□□□ 1.22
FOXA1-203ENST00000553751 LPXNO60711 386 aa22.67■■□□□ 1.22
FOXA1-203ENST00000553751 LINC00271P0C7V0 271 aa22.67■■□□□ 1.22
FOXA1-203ENST00000553751 FAM189BP81408 668 aa22.67■■□□□ 1.22
FOXA1-203ENST00000553751 GDPD5Q8WTR4 605 aa22.67■■□□□ 1.22
FOXA1-203ENST00000553751 INO80BQ9C086 356 aaPredicted RBP22.67■■□□□ 1.22
FOXA1-203ENST00000553751 NLRC5Q86WI3 1866 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 ASAP2O43150 1006 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 SRGAP2CP0DJJ0 459 aa22.66■■□□□ 1.22
FOXA1-203ENST00000553751 ZSCAN20P17040 1043 aaPredicted RBP22.66■■□□□ 1.22
FOXA1-203ENST00000553751 IBSPP21815 317 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms