RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 C16orf92Q96LL3 132 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 ZNF747Q9BV97 191 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 DENND2AQ9ULE3 1009 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 ZKSCAN5Q9Y2L8 839 aa5.89□□□□□ -1.47
SCFD1-210ENST00000553693 MSX2P35548 267 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-210ENST00000553693 GRM7Q14831 915 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 NRN1LQ496H8 165 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 MAMDC4Q6UXC1 1216 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 BMP8AQ7Z5Y6 402 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 KIF18BQ86Y91 864 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 BCL6BQ8N143 479 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-210ENST00000553693 C7orf31Q8N865 590 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 RABGGTAQ92696 567 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 GCDHQ92947 438 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-210ENST00000553693 TUBGCP5Q96RT8 1024 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 ORAI3Q9BRQ5 295 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 PLA2G3Q9NZ20 509 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 SPO11Q9Y5K1 396 aa5.88□□□□□ -1.47
SCFD1-210ENST00000553693 GAS7O60861 476 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 AMHP03971 560 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 ACRV1P26436 265 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 ADAM15Q13444 863 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 RIN1Q13671 783 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 TIGD7Q6NT04 549 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-210ENST00000553693 Q6ZSN1 163 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 C16orf86Q6ZW13 317 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 ZZZ3Q8IYH5 903 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 GPR135Q8IZ08 494 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 APPBP2Q92624 585 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 DYDC2Q96IM9 177 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 RNPC3Q96LT9 517 aaKnown RBP5.87□□□□□ -1.47
SCFD1-210ENST00000553693 SLC6A15Q9H2J7 730 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 PIF1Q9H611 641 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 POLR3BQ9NW08 1133 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-210ENST00000553693 AURKAIP1Q9NWT8 199 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-210ENST00000553693 CD2APQ9Y5K6 639 aa5.87□□□□□ -1.47
SCFD1-210ENST00000553693 A0A1W2PRX2 142 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 CYR61O00622 381 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 CYP27B1O15528 508 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 PTX3P26022 381 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-210ENST00000553693 FOXL1Q12952 345 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 USP39Q53GS9 565 aaKnown RBP5.86□□□□□ -1.47
SCFD1-210ENST00000553693 PHYKPLQ8IUZ5 450 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 Q8N1X5 172 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 D2HGDHQ8N465 521 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 ZNF808Q8N4W9 903 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-210ENST00000553693 WDR92Q96MX6 357 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 MPHOSPH9Q99550 1183 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 ELF4Q99607 663 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-210ENST00000553693 ZNF341Q9BYN7 854 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 TLR9Q9NR96 1032 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 TOMM22Q9NS69 142 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 OXSMQ9NWU1 459 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 SYNPO2Q9UMS6 1093 aa5.86□□□□□ -1.47
SCFD1-210ENST00000553693 SLC9A1P19634 815 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 POU3F2P20265 443 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-210ENST00000553693 TGM1P22735 817 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 NEK4P51957 841 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 FOXE3Q13461 319 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 TCIRG1Q13488 830 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 GAGE13Q4V321 117 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 MIIPQ5JXC2 388 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 CREB3L3Q68CJ9 461 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 ESRP1Q6NXG1 681 aaKnown RBP5.85□□□□□ -1.47
SCFD1-210ENST00000553693 PASD1Q8IV76 773 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 EFHBQ8N7U6 833 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 NKD2Q969F2 451 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-210ENST00000553693 TMEM176AQ96HP8 235 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 IFT57Q9NWB7 429 aa5.85□□□□□ -1.47
SCFD1-210ENST00000553693 GOLGA8BA8MQT2 603 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 CAPN14A8MX76 684 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 KPNA6O60684 536 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 CDC45O75419 566 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 F2P00734 622 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 CD40P25942 277 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 HIBADHP31937 336 aaKnown RBP5.84□□□□□ -1.47
SCFD1-210ENST00000553693 ACVRL1P37023 503 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 ADCY7P51828 1080 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 BPIFB4P59827 614 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 ATP2C1P98194 919 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-210ENST00000553693 ADCY2Q08462 1091 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 MYBPC3Q14896 1274 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 KIAA1841Q6NSI8 718 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 NPM2Q86SE8 214 aaKnown RBP5.84□□□□□ -1.47
SCFD1-210ENST00000553693 LRRTM3Q86VH5 581 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 SGMS1Q86VZ5 419 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 ANKRD35Q8N283 1001 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 NINJ1Q92982 152 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 HAPLN2Q9GZV7 340 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 CSRNP2Q9H175 543 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 FANCLQ9NW38 375 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 MAGEL2Q9UJ55 1249 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 PLAAQ9Y263 795 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 GIT1Q9Y2X7 761 aa5.84□□□□□ -1.47
SCFD1-210ENST00000553693 RBM8AQ9Y5S9 174 aaKnown RBP5.84□□□□□ -1.47
SCFD1-210ENST00000553693 DAPK3O43293 454 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 ATP2A2P16615 1042 aaKnown RBP5.83□□□□□ -1.48
SCFD1-210ENST00000553693 PTH1RQ03431 593 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 MAN2A1Q16706 1144 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 KANSL1Q7Z3B3 1105 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms