RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 GDF15Q99988 308 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 MTIF3Q9H2K0 278 aaKnown RBP15.38■□□□□ 0.05
TUBB3-202ENST00000553656 COL4A3BPQ9Y5P4 624 aa15.38■□□□□ 0.05
TUBB3-202ENST00000553656 GOLGA6L4A6NEF3 574 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 ASAP2O43150 1006 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 NBNO60934 754 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 GHRP10912 638 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 GPC3P51654 580 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 CRYBB1P53674 252 aaPredicted RBP15.37■□□□□ 0.05
TUBB3-202ENST00000553656 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
TUBB3-202ENST00000553656 TFDP1Q14186 410 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 ODR4Q5SWX8 454 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 AXDND1Q5T1B0 1012 aaPredicted RBP15.37■□□□□ 0.05
TUBB3-202ENST00000553656 SHC4Q6S5L8 630 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 ZNF410Q86VK4 478 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 SYT2Q8N9I0 419 aaPredicted RBP15.37■□□□□ 0.05
TUBB3-202ENST00000553656 PRPF31Q8WWY3 499 aaKnown RBP15.37■□□□□ 0.05
TUBB3-202ENST00000553656 LARP4BQ92615 738 aaKnown RBP15.37■□□□□ 0.05
TUBB3-202ENST00000553656 RAD54LQ92698 747 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 OSMRQ99650 979 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 PYM1Q9BRP8 204 aaKnown RBP15.37■□□□□ 0.05
TUBB3-202ENST00000553656 GCOM2Q9BZD3 368 aaPredicted RBP15.37■□□□□ 0.05
TUBB3-202ENST00000553656 POLR3FQ9H1D9 316 aaPredicted RBP15.37■□□□□ 0.05
TUBB3-202ENST00000553656 GDPD2Q9HCC8 539 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 XPNPEP1Q9NQW7 623 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 KCND2Q9NZV8 630 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 SQORQ9Y6N5 450 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 EVPLQ92817 2033 aa15.37■□□□□ 0.05
TUBB3-202ENST00000553656 GPR32O75388 356 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 FGBP02675 491 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 CXCL10P02778 98 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 KRT18P05783 430 aaKnown RBP15.36■□□□□ 0.05
TUBB3-202ENST00000553656 BMP8BP34820 402 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 LAMTOR4Q0VGL1 99 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 PAK2Q13177 524 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 DHX8Q14562 1220 aaKnown RBP15.36■□□□□ 0.05
TUBB3-202ENST00000553656 MBTPS1Q14703 1052 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 FBXO47Q5MNV8 452 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 ADALQ6DHV7 355 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 CNKSR3Q6P9H4 555 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 TSHZ1Q6ZSZ6 1077 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 PDILTQ8N807 584 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 KIFAP3Q92845 792 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 ZNF668Q96K58 619 aaPredicted RBP15.36■□□□□ 0.05
TUBB3-202ENST00000553656 TIPINQ9BVW5 301 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 IFIH1Q9BYX4 1025 aaKnown RBP15.36■□□□□ 0.05
TUBB3-202ENST00000553656 PANK2Q9BZ23 570 aa15.36■□□□□ 0.05
TUBB3-202ENST00000553656 TNRC18O15417 2968 aaPredicted RBP15.35■□□□□ 0.05
TUBB3-202ENST00000553656 GPR182O15218 404 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 RPS6KA5O75582 802 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 SRGAP2CP0DJJ0 459 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 CMA1P23946 247 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 ARL2P36404 184 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 PHKA2P46019 1235 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 EPHB4P54760 987 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 SLC12A3P55017 1021 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 MCM6Q14566 821 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 LPIN1Q14693 890 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 PPP2R5AQ15172 486 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 TPRNQ4KMQ1 711 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 RESP18Q5W5W9 173 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 RINT1Q6NUQ1 792 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 ZNF365Q70YC5 407 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 GPBP1Q86WP2 473 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 KSR1Q8IVT5 923 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 IQUBQ8NA54 791 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 RNF149Q8NC42 400 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 APBB2Q92870 758 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 DHX58Q96C10 678 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 IFT74Q96LB3 600 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 DRC1Q96MC2 740 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 RUSC1Q9BVN2 902 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 INO80BQ9C086 356 aaPredicted RBP15.35■□□□□ 0.05
TUBB3-202ENST00000553656 ADAMTS10Q9H324 1103 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 GPRC5CQ9NQ84 441 aa15.35■□□□□ 0.05
TUBB3-202ENST00000553656 A0A087WZ62 844 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 ZBBXA8MT70 800 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 EFCAB14O75071 495 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 BAIAP3O94812 1187 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 SFPQP23246 707 aaKnown RBP eCLIP15.34■□□□□ 0.05
TUBB3-202ENST00000553656 EIF4BP23588 611 aaKnown RBP15.34■□□□□ 0.05
TUBB3-202ENST00000553656 GUCY2CP25092 1073 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 NFX1Q12986 1120 aaKnown RBP15.34■□□□□ 0.05
TUBB3-202ENST00000553656 IKBKEQ14164 716 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 GPNMBQ14956 572 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 PLEKHG4Q58EX7 1191 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 TMEM240Q5SV17 173 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 SV2BQ7L1I2 683 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 OTOP2Q7RTS6 562 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 DBF4BQ8NFT6 615 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 ASAP3Q8TDY4 903 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 RNPC3Q96LT9 517 aaKnown RBP15.34■□□□□ 0.05
TUBB3-202ENST00000553656 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.34■□□□□ 0.052e-6■□□□□ 8.5
TUBB3-202ENST00000553656 FDXACB1Q9BRP7 624 aaPredicted RBP15.34■□□□□ 0.05
TUBB3-202ENST00000553656 CUEDC2Q9H467 287 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 BLOC1S4Q9NUP1 217 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 KCNH3Q9ULD8 1083 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 SCN5AQ14524 2016 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 CEP290O15078 2479 aa15.34■□□□□ 0.05
TUBB3-202ENST00000553656 ABHD14A-ACY1A0A1B0GW23 586 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms