RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 FGFR1P11362 822 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 PABPC1P11940 636 aaKnown RBP5.82□□□□□ -1.48
ATXN3-220ENST00000553491 IFNGR1P15260 489 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 ERVFRD-1P60508 538 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 RPS8P62241 208 aaKnown RBP5.82□□□□□ -1.48
ATXN3-220ENST00000553491 YBX1P67809 324 aaKnown RBP5.82□□□□□ -1.48
ATXN3-220ENST00000553491 GCKRQ14397 625 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 ALDH1L2Q3SY69 923 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 CCDC93Q567U6 631 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 CWF19L1Q69YN2 538 aaKnown RBP5.82□□□□□ -1.48
ATXN3-220ENST00000553491 DPP8Q6V1X1 898 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-220ENST00000553491 ZNF605Q86T29 641 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 ANKRD18AQ8IVF6 992 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 SCUBE1Q8IWY4 988 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 C16orf71Q8IYS4 520 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-220ENST00000553491 TRMT2AQ8IZ69 625 aaKnown RBP5.82□□□□□ -1.48
ATXN3-220ENST00000553491 RTKN2Q8IZC4 609 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 CRACR2BQ8N4Y2 399 aaPredicted RBP5.82□□□□□ -1.48
ATXN3-220ENST00000553491 LINS1Q8NG48 757 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 JDP2Q8WYK2 163 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 KCNN1Q92952 543 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 DHRS4Q9BTZ2 278 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 KRTAP4-2Q9BYR5 136 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 TAOK3Q9H2K8 898 aa5.82□□□□□ -1.48
ATXN3-220ENST00000553491 SF3B6Q9Y3B4 125 aaKnown RBP5.82□□□□□ -1.48
ATXN3-220ENST00000553491 ABCC4O15439 1325 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 TRBV23-1A0A0A0MS06 115 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 TEX51A0A1B0GUA7 166 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 HRKO00198 91 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 MSL3P1P0C860 447 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 SDHBP21912 280 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 NOP2P46087 812 aaKnown RBP5.81□□□□□ -1.48
ATXN3-220ENST00000553491 RARSP54136 660 aaKnown RBP5.81□□□□□ -1.48
ATXN3-220ENST00000553491 GYS2P54840 703 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 MVKQ03426 396 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 CYP4F3Q08477 520 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 GRB10Q13322 594 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 GRAPQ13588 217 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 BEND3Q5T5X7 828 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 ADGRF1Q5T601 910 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 NSMFQ6X4W1 530 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 ATG14Q6ZNE5 492 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 SP8Q8IXZ3 490 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 GRAPLQ8TC17 118 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-220ENST00000553491 CELF1Q92879 486 aaKnown RBP5.81□□□□□ -1.48
ATXN3-220ENST00000553491 MPHOSPH8Q99549 860 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 CDC6Q99741 560 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 IER2Q9BTL4 223 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 API5Q9BZZ5 524 aaKnown RBP5.81□□□□□ -1.48
ATXN3-220ENST00000553491 NKX2-4Q9H2Z4 354 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 MRPS23Q9Y3D9 190 aaKnown RBP5.81□□□□□ -1.48
ATXN3-220ENST00000553491 ATP6V0A2Q9Y487 856 aa5.81□□□□□ -1.48
ATXN3-220ENST00000553491 PTPRCP08575 1304 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 RNF123Q5XPI4 1314 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 ZBED9Q6R2W3 1325 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CCDC163A0A0D9SF12 145 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 ANKRD18BA2A2Z9 1011 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 KLRG2A4D1S0 409 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 OR14I1A6ND48 311 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 GRM8O00222 908 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 NFIBO00712 420 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 AURKAO14965 403 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 PPIP5K2O43314 1243 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 DLX3O60479 287 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 SEMA7AO75326 666 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 ALDH1L1O75891 902 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CD3EP07766 207 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 TMEM253P0C7T8 217 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 PRKCAP17252 672 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 IGHMBP2P38935 993 aaKnown RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 IARSP41252 1262 aaKnown RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 KCNJ4P48050 445 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 GFRA1P56159 465 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CTSWP56202 376 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 DLG4P78352 724 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 AMPD2Q01433 879 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 POU4F1Q01851 419 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 IFIT5Q13325 482 aaKnown RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CBX2Q14781 532 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 SF3B3Q15393 1217 aaKnown RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 TCEA2Q15560 299 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 DPY19L1Q2PZI1 675 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CCDC57Q2TAC2 916 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CRY2Q49AN0 593 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 RCSD1Q6JBY9 416 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 LMBR1LQ6UX01 489 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 SPOCD1Q6ZMY3 1216 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 SYNPOQ8N3V7 929 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 SUPT20HQ8NEM7 779 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 TTLL11Q8NHH1 800 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 PTCHD1Q96NR3 888 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CDC5LQ99459 802 aaKnown RBP5.8□□□□□ -1.48
ATXN3-220ENST00000553491 FEZ1Q99689 392 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 GREM2Q9H772 168 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 TNFRSF12AQ9NP84 129 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CYP26B1Q9NR63 512 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 CNNM1Q9NRU3 951 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 KLHL14Q9P2G3 628 aa5.8□□□□□ -1.48
ATXN3-220ENST00000553491 IMPACTQ9P2X3 320 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms