RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
ACTN1-208ENST00000553370 HOXA2O43364 376 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 CHMP2AO43633 222 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 LINC00271P0C7V0 271 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 ZSCAN20P17040 1043 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-208ENST00000553370 LAG3P18627 525 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 DNAJB1P25685 340 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 CRYBB1P53674 252 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-208ENST00000553370 RCAN1P53805 252 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 UBE3AQ05086 875 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 APOBRQ0VD83 1088 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 PLPP4Q5VZY2 271 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 ZNF746Q6NUN9 644 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-208ENST00000553370 BLOC1S2Q6QNY1 142 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 ABHD15Q6UXT9 468 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 Q6ZUG5 572 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 CENPQQ7L2Z9 268 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-208ENST00000553370 RTN4RL1Q86UN2 441 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-208ENST00000553370 RNF135Q8IUD6 432 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 COLGALT1Q8NBJ5 622 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 TMEM87AQ8NBN3 555 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 SPPL3Q8TCT6 385 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 BRF1Q92994 677 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 TMX1Q9H3N1 280 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 GABBR1Q9UBS5 961 aa11.21□□□□□ -0.61
ACTN1-208ENST00000553370 PUF60Q9UHX1 559 aaKnown RBP11.21□□□□□ -0.61
ACTN1-208ENST00000553370 TDRD15B5MCY1 1934 aaKnown RBP11.2□□□□□ -0.62
ACTN1-208ENST00000553370 WDR64B1ANS9 1081 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 FAM86B1E9PN63 330 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 MAGEB2O15479 319 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 FGF18O76093 207 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 ATG7O95352 703 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 FAM86B2P0C5J1 330 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 FGFR1P11362 822 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 CDC27P30260 824 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 CLCN3P51790 818 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 EXOSC10Q01780 885 aaKnown RBP11.2□□□□□ -0.62
ACTN1-208ENST00000553370 ADAM15Q13444 863 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 ADCK5Q3MIX3 580 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 LLGL2Q6P1M3 1020 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 FAM43BQ6ZT52 329 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-208ENST00000553370 SUGP1Q8IWZ8 645 aaKnown RBP11.2□□□□□ -0.62
ACTN1-208ENST00000553370 KIAA0319LQ8IZA0 1049 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 NLRP7Q8WX94 980 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 RGS18Q9NS28 235 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 TMEM161AQ9NX61 479 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 PCDHGC5Q9Y5F6 944 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 PCDHA10Q9Y5I2 948 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 KMT2EQ8IZD2 1858 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 CACNA1HO95180 2353 aa11.2□□□□□ -0.62
ACTN1-208ENST00000553370 ARID2Q68CP9 1835 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 IGKV6D-21A0A0A0MT36 114 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 ESYT2A0FGR8 921 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 PER2O15055 1255 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 MGEA5O60502 916 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 GAS7O60861 476 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 C22orf31O95567 290 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 CPA1P15085 419 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 ADD1P35611 737 aaKnown RBP11.19□□□□□ -0.62
ACTN1-208ENST00000553370 PPM1AP35813 382 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
ACTN1-208ENST00000553370 KRT17Q04695 432 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 FUT2Q10981 343 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 BMS1Q14692 1282 aaKnown RBP11.19□□□□□ -0.62
ACTN1-208ENST00000553370 FAM102BQ5T8I3 360 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 PDE12Q6L8Q7 609 aaKnown RBP11.19□□□□□ -0.62
ACTN1-208ENST00000553370 EFCAB12Q6NXP0 572 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 ALYREFQ86V81 257 aaKnown RBP11.19□□□□□ -0.62
ACTN1-208ENST00000553370 FAM228AQ86W67 206 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 TRIM22Q8IYM9 498 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 LRRC43Q8N309 656 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 SMRP1Q8NCR6 262 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 RASGRP4Q8TDF6 673 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 TMEM40Q8WWA1 233 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 PHKBQ93100 1093 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 RPGRIP1Q96KN7 1286 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 ZNF558Q96NG5 402 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 CDCA3Q99618 268 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-208ENST00000553370 TEKT3Q9BXF9 490 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 NRBP2Q9NSY0 501 aa11.19□□□□□ -0.62
ACTN1-208ENST00000553370 TYW1Q9NV66 732 aaKnown RBP11.19□□□□□ -0.62
ACTN1-208ENST00000553370 SEPT9Q9UHD8 586 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-208ENST00000553370 USP15Q9Y4E8 981 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-208ENST00000553370 IGLV3-22A0A075B6J6 115 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 CPLX1O14810 134 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 OATP04181 439 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 CYP3A4P08684 503 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 PSMA5P28066 241 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 TECP42680 631 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 JAK3P52333 1124 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 NLRP11P59045 1033 aaKnown RBP11.18□□□□□ -0.62
ACTN1-208ENST00000553370 NLRP5P59047 1200 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 PRKCEQ02156 737 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 TBC1D8BQ0IIM8 1120 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 COASYQ13057 564 aa11.18□□□□□ -0.62
ACTN1-208ENST00000553370 HERC4Q5GLZ8 1057 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-208ENST00000553370 LRCH2Q5VUJ6 765 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms