RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 MYH15Q9Y2K3 1946 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 SPDYE3A6NKU9 549 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 HBP1O60381 514 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 DDAH1O94760 285 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 C22orf31O95567 290 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 AOC1P19801 751 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 SMARCA1P28370 1054 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 MTHFRP42898 656 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 METAP2P50579 478 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDK4-213ENST00000552713 CRYBB1P53674 252 aaPredicted RBP9.67□□□□□ -0.86
CDK4-213ENST00000552713 KRT17Q04695 432 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 SMC1AQ14683 1233 aaKnown RBP9.67□□□□□ -0.86
CDK4-213ENST00000552713 ANGPT1Q15389 498 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 KIAA1841Q6NSI8 718 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 TYW1BQ6NUM6 668 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 TRMT1LQ7Z2T5 733 aaKnown RBP9.67□□□□□ -0.86
CDK4-213ENST00000552713 RALYLQ86SE5 291 aaKnown RBP9.67□□□□□ -0.86
CDK4-213ENST00000552713 ECHDC2Q86YB7 292 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 CCDC105Q8IYK2 499 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 LRRC43Q8N309 656 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 CCDC82Q8N4S0 544 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 CTCFLQ8NI51 663 aaPredicted RBP9.67□□□□□ -0.86
CDK4-213ENST00000552713 MAP3K14Q99558 947 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 SDF4Q9BRK5 362 aa9.67□□□□□ -0.86
CDK4-213ENST00000552713 DBR1Q9UK59 544 aaKnown RBP9.67□□□□□ -0.86
CDK4-213ENST00000552713 COL1A2P08123 1366 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 BACH1O14867 736 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 DHX15O43143 795 aaKnown RBP9.66□□□□□ -0.86
CDK4-213ENST00000552713 MAP3K13O43283 966 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 NARSO43776 548 aaKnown RBP9.66□□□□□ -0.86
CDK4-213ENST00000552713 CXCL14O95715 111 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 EOMESO95936 686 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 GSPT1P15170 499 aaKnown RBP9.66□□□□□ -0.86
CDK4-213ENST00000552713 FGFR4P22455 802 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 KIF5BP33176 963 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 CA8P35219 290 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 PPM1AP35813 382 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 CLCN3P51790 818 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 SART3Q15020 963 aaKnown RBP9.66□□□□□ -0.86
CDK4-213ENST00000552713 SWSAP1Q6NVH7 229 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 TMC5Q6UXY8 1006 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 ZNF598Q86UK7 904 aaKnown RBP9.66□□□□□ -0.86
CDK4-213ENST00000552713 METTL13Q8N6R0 699 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 DTWD2Q8NBA8 298 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 RNF169Q8NCN4 708 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 HELQQ8TDG4 1101 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 SLC22A17Q8WUG5 538 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 BCL7CQ8WUZ0 217 aaPredicted RBP9.66□□□□□ -0.86
CDK4-213ENST00000552713 TNPO1Q92973 898 aaKnown RBP9.66□□□□□ -0.86
CDK4-213ENST00000552713 ADAMTS10Q9H324 1103 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 ZNF292O60281 2723 aa9.66□□□□□ -0.86
CDK4-213ENST00000552713 NCOR2Q9Y618 2525 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 GPR179Q6PRD1 2367 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 COL4A3Q01955 1670 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.65□□□□□ -0.86
CDK4-213ENST00000552713 MEIS1O00470 390 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 ADAMTS3O15072 1205 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 CSDE1O75534 798 aaKnown RBP9.65□□□□□ -0.86
CDK4-213ENST00000552713 KRT37O76014 449 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 SLC26A2P50443 739 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 BCAR1P56945 870 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 NLRP11P59045 1033 aaKnown RBP9.65□□□□□ -0.86
CDK4-213ENST00000552713 CEP55Q53EZ4 464 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 ZNF484Q5JVG2 852 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 ATAT1Q5SQI0 421 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 ODR4Q5SWX8 454 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 WWC2Q6AWC2 1192 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 HEATR3Q7Z4Q2 680 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 KIAA2013Q8IYS2 634 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 SIX5Q8N196 739 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 VPS52Q8N1B4 723 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 LINC01465Q8N7H1 131 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 LZTS2Q9BRK4 669 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 VN1R3Q9BXE9 311 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 ZBP1Q9H171 429 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 ZNF302Q9NR11 478 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 CYP26B1Q9NR63 512 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 USTQ9Y2C2 406 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 R4GN57 208 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 DMXL1Q9Y485 3027 aa9.65□□□□□ -0.86
CDK4-213ENST00000552713 TDRD15B5MCY1 1934 aaKnown RBP9.64□□□□□ -0.87
CDK4-213ENST00000552713 PATJQ8NI35 1801 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 KRBA1A5PL33 1030 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 FAM86B1E9PN63 330 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 SH2B2O14492 632 aaPredicted RBP9.64□□□□□ -0.87
CDK4-213ENST00000552713 HOXA2O43364 376 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 PRC1O43663 620 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 B4GALT3O60512 393 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 N4BP1O75113 896 aaKnown RBP9.64□□□□□ -0.87
CDK4-213ENST00000552713 FAM86B2P0C5J1 330 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 CHMLP26374 656 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 TIE1P35590 1138 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 TDGQ13569 410 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 LONRF3Q496Y0 759 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 FAM160B1Q5W0V3 765 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 TMTC3Q6ZXV5 915 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 ABI1Q8IZP0 508 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 LRRC71Q8N4P6 559 aa9.64□□□□□ -0.87
CDK4-213ENST00000552713 RSAD2Q8WXG1 361 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms