RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 SMARCA1P28370 1054 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 MCM7P33993 719 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 KRT9P35527 623 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 STAT6P42226 847 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 DNM2P50570 870 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 FXR1P51114 621 aaKnown RBP eCLIP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 AFF1P51825 1210 aaKnown RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 KRT83P78385 493 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 GSTO1P78417 241 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 MECOMQ03112 1051 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 UBXN1Q04323 297 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF252P-AS1Q0IIN9 211 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 GRM4Q14833 912 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 MTF1Q14872 753 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 IL17AQ16552 155 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 PTPN21Q16825 1174 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 LONRF2Q1L5Z9 754 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 HP1BP3Q5SSJ5 553 aaPredicted RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 RASIP1Q5U651 963 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 MAP1SQ66K74 1059 aaPredicted RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 PIK3AP1Q6ZUJ8 805 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 REC114Q7Z4M0 266 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 CTAGE6Q86UF2 777 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 FAM114A1Q8IWE2 563 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 CTAGE4Q8IX94 777 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 AMOTL1Q8IY63 956 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 MB21D1Q8N884 522 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF417Q8TAU3 575 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 GRIN3AQ8TCU5 1115 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 EDARADDQ8WWZ3 215 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 EXOC4Q96A65 974 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 RPGRIP1Q96KN7 1286 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 AK8Q96MA6 479 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 FERD3LQ96RJ6 166 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF587Q96SQ5 575 aaPredicted RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 NUP88Q99567 741 aaPredicted RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 ZSWIM4Q9H7M6 989 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF408Q9H9D4 720 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF287Q9HBT7 754 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 LZTFL1Q9NQ48 299 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 ABHD10Q9NUJ1 306 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 CAPN11Q9UMQ6 739 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 LUC7L2Q9Y383 392 aaKnown RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 EPN1Q9Y6I3 576 aaPredicted RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 COL22A1Q8NFW1 1626 aaPredicted RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 SPATA31A1Q5TZJ5 1347 aa6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF335Q9H4Z2 1342 aaPredicted RBP6.67□□□□□ -1.34
CHMP4A-210ENST00000552620 CACNA1SQ13698 1873 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 MYH2Q9UKX2 1941 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 CICQ96RK0 1608 aaPredicted RBP6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 KAT6BQ8WYB5 2073 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 CYP2D7A0A087X1C5 515 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 PSMD14O00487 310 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 PSMA7O14818 248 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 RHOBTB3O94955 611 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 SEC31AO94979 1220 aaKnown RBP6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 BAG3O95817 575 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 LDHCP07864 332 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 IMPDH2P12268 514 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 OAS2P29728 719 aaKnown RBP6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 CYLC1P35663 651 aaPredicted RBP6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 UBA7P41226 1012 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 ARHGAP25P42331 645 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 PRCPP42785 496 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 ERVK-24P63145 666 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 CDK17Q00537 523 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 AMPD3Q01432 767 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 KRT76Q01546 638 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 TFAP4Q01664 338 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 RPL6Q02878 288 aaKnown RBP6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 COBLL1Q53SF7 1204 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 FIGNQ5HY92 759 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 BEND6Q5SZJ8 279 aaPredicted RBP6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 C12orf60Q5U649 245 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 MSL1Q68DK7 614 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 RCSD1Q6JBY9 416 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 CHSY3Q70JA7 882 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 PDZD3Q86UT5 571 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 MAP4K3Q8IVH8 894 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 CCDC170Q8IYT3 715 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF444Q8N0Y2 327 aaPredicted RBP6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 REXO1Q8N1G1 1221 aaKnown RBP6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 SLC35F6Q8N357 371 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 KLHL23Q8NBE8 558 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 GALNT6Q8NCL4 622 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 FBXO27Q8NI29 283 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 WDR66Q8TBY9 1149 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 GAL3ST3Q96A11 431 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 ACDQ96AP0 544 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 ANAPC16Q96DE5 110 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 ACSBG1Q96GR2 724 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 TRIM55Q9BYV6 548 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 VPS16Q9H269 839 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 BLZF1Q9H2G9 400 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 DISC1Q9NRI5 854 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNHIT6Q9NWK9 470 aaKnown RBP6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 TAB2Q9NYJ8 693 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 MYO6Q9UM54 1294 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 L1RE1Q9UN81 338 aa6.66□□□□□ -1.34
CHMP4A-210ENST00000552620 CNTNAP4Q9C0A0 1308 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms