RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 OSBPL6Q9BZF3 934 aa14.35□□□□□ -0.11
SNRPF-204ENST00000552085 WDR6Q9NNW5 1121 aaKnown RBP14.35□□□□□ -0.11
SNRPF-204ENST00000552085 GINS2Q9Y248 185 aa14.35□□□□□ -0.11
SNRPF-204ENST00000552085 MTF2Q9Y483 593 aaPredicted RBP14.35□□□□□ -0.11
SNRPF-204ENST00000552085 CLUHO75153 1309 aa14.35□□□□□ -0.11
SNRPF-204ENST00000552085 FRMPD4Q14CM0 1322 aa14.35□□□□□ -0.11
SNRPF-204ENST00000552085 SMIM35A0A1B0GVV1 85 aa14.34□□□□□ -0.11
SNRPF-204ENST00000552085 FAM170BA6NMN3 283 aa14.34□□□□□ -0.11
SNRPF-204ENST00000552085 ZZEF1O43149 2961 aa14.34□□□□□ -0.11
SNRPF-204ENST00000552085 SMARCA5O60264 1052 aaPredicted RBP14.34□□□□□ -0.11
SNRPF-204ENST00000552085 ZIC2O95409 532 aaPredicted RBP14.34□□□□□ -0.11
SNRPF-204ENST00000552085 ALDH7A1P49419 539 aaKnown RBP14.34□□□□□ -0.11
SNRPF-204ENST00000552085 POLGP54098 1239 aaPredicted RBP14.34□□□□□ -0.11
SNRPF-204ENST00000552085 UBXN2BQ14CS0 331 aa14.34□□□□□ -0.11
SNRPF-204ENST00000552085 PNMA1Q8ND90 353 aa14.34□□□□□ -0.11
SNRPF-204ENST00000552085 CMASQ8NFW8 434 aaPredicted RBP14.34□□□□□ -0.11
SNRPF-204ENST00000552085 PANK1Q8TE04 598 aa14.34□□□□□ -0.11
SNRPF-204ENST00000552085 TMEM40Q8WWA1 233 aa14.34□□□□□ -0.11
SNRPF-204ENST00000552085 LRRCC1Q9C099 1032 aa14.34□□□□□ -0.11
SNRPF-204ENST00000552085 PRMT8Q9NR22 394 aaPredicted RBP14.34□□□□□ -0.11
SNRPF-204ENST00000552085 ZBTB40Q9NUA8 1239 aa14.34□□□□□ -0.11
SNRPF-204ENST00000552085 GREB1Q4ZG55 1949 aa14.34□□□□□ -0.11
SNRPF-204ENST00000552085 SRRM3A6NNA2 597 aaPredicted RBP14.33□□□□□ -0.12
SNRPF-204ENST00000552085 ANHXE9PGG2 379 aa14.33□□□□□ -0.12
SNRPF-204ENST00000552085 FOXD2O60548 495 aaPredicted RBP14.33□□□□□ -0.12
SNRPF-204ENST00000552085 PPP1R11O60927 126 aaPredicted RBP14.33□□□□□ -0.12
SNRPF-204ENST00000552085 CLCN4P51793 760 aa14.33□□□□□ -0.12
SNRPF-204ENST00000552085 BCAR1P56945 870 aa14.33□□□□□ -0.12
SNRPF-204ENST00000552085 SNW1Q13573 536 aaKnown RBP14.33□□□□□ -0.12
SNRPF-204ENST00000552085 HTR4Q13639 388 aa14.33□□□□□ -0.12
SNRPF-204ENST00000552085 DSC3Q14574 896 aa14.33□□□□□ -0.12
SNRPF-204ENST00000552085 WTAPQ15007 396 aa14.33□□□□□ -0.12
SNRPF-204ENST00000552085 DDX53Q86TM3 631 aaKnown RBP14.33□□□□□ -0.12
SNRPF-204ENST00000552085 DGKHQ86XP1 1220 aa14.33□□□□□ -0.12
SNRPF-204ENST00000552085 CELF5Q8N6W0 485 aaKnown RBP14.33□□□□□ -0.12
SNRPF-204ENST00000552085 TRAPPC12Q8WVT3 735 aa14.33□□□□□ -0.12
SNRPF-204ENST00000552085 BBXQ8WY36 941 aaPredicted RBP14.33□□□□□ -0.12
SNRPF-204ENST00000552085 TNPO1Q92973 898 aaKnown RBP14.33□□□□□ -0.12
SNRPF-204ENST00000552085 MYL10Q9BUA6 226 aa14.33□□□□□ -0.12
SNRPF-204ENST00000552085 CDHR5Q9HBB8 845 aa14.33□□□□□ -0.12
SNRPF-204ENST00000552085 GCN1Q92616 2671 aaKnown RBP14.33□□□□□ -0.12
SNRPF-204ENST00000552085 TMEM8BA6NDV4 472 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 TAF4O00268 1085 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 KLRC2P26717 231 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 GPC5P78333 572 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 PRKCQQ04759 706 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 MLF2Q15773 248 aaPredicted RBP14.32□□□□□ -0.12
SNRPF-204ENST00000552085 VPS53Q5VIR6 699 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 TSHZ3Q63HK5 1081 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 CYP26C1Q6V0L0 522 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 GPATCH3Q96I76 525 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 ZKSCAN3Q9BRR0 538 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 RHOBTB2Q9BYZ6 727 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 DDX19BQ9UMR2 479 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 NUMBLQ9Y6R0 609 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 MTCL1Q9Y4B5 1905 aaKnown RBP14.32□□□□□ -0.12
SNRPF-204ENST00000552085 CEP295Q9C0D2 2601 aa14.32□□□□□ -0.12
SNRPF-204ENST00000552085 CCDC195A0A1B0GUA6 201 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 TRIM6-TRIM34B2RNG4 842 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 TM4SF5O14894 197 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 PARP1P09874 1014 aaKnown RBP14.31□□□□□ -0.12
SNRPF-204ENST00000552085 LAMP2P13473 410 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 LIMK1P53667 647 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 PLCB4Q15147 1175 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 ALX1Q15699 326 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 CLLU1OSQ5K130 101 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 ZBTB41Q5SVQ8 909 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 MTHFD1LQ6UB35 978 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 PRR23BQ6ZRT6 265 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 NLRX1Q86UT6 975 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 TMEM173Q86WV6 379 aaPredicted RBP14.31□□□□□ -0.12
SNRPF-204ENST00000552085 MAP4K1Q92918 833 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 CLDN23Q96B33 292 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 KLHL5Q96PQ7 755 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 EMILIN2Q9BXX0 1053 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 CHMP4BQ9H444 224 aaKnown RBP14.31□□□□□ -0.12
SNRPF-204ENST00000552085 KAT14Q9H8E8 782 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 LTB4R2Q9NPC1 389 aa14.31□□□□□ -0.12
SNRPF-204ENST00000552085 ATP9AO75110 1047 aa14.3□□□□□ -0.12
SNRPF-204ENST00000552085 NRLP54845 237 aa14.3□□□□□ -0.12
SNRPF-204ENST00000552085 SLC44A4Q53GD3 710 aa14.3□□□□□ -0.12
SNRPF-204ENST00000552085 RSPO2Q6UXX9 243 aaPredicted RBP14.3□□□□□ -0.12
SNRPF-204ENST00000552085 FAM228AQ86W67 206 aa14.3□□□□□ -0.12
SNRPF-204ENST00000552085 ECHDC2Q86YB7 292 aa14.3□□□□□ -0.12
SNRPF-204ENST00000552085 MTMR8Q96EF0 704 aa14.3□□□□□ -0.12
SNRPF-204ENST00000552085 MRPL9Q9BYD2 267 aaKnown RBP14.3□□□□□ -0.12
SNRPF-204ENST00000552085 MAN1C1Q9NR34 630 aa14.3□□□□□ -0.12
SNRPF-204ENST00000552085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNRPF-204ENST00000552085 ZBTB5O15062 677 aa14.29□□□□□ -0.12
SNRPF-204ENST00000552085 INPPL1O15357 1258 aa14.29□□□□□ -0.12
SNRPF-204ENST00000552085 CNPP09543 421 aaKnown RBP14.29□□□□□ -0.12
SNRPF-204ENST00000552085 KCNA2P16389 499 aa14.29□□□□□ -0.12
SNRPF-204ENST00000552085 RPS9P46781 194 aaKnown RBP14.29□□□□□ -0.12
SNRPF-204ENST00000552085 MFSD6Q6ZSS7 791 aa14.29□□□□□ -0.12
SNRPF-204ENST00000552085 RNF169Q8NCN4 708 aa14.29□□□□□ -0.12
SNRPF-204ENST00000552085 ST13P5Q8NFI4 369 aaPredicted RBP14.29□□□□□ -0.12
SNRPF-204ENST00000552085 HELQQ8TDG4 1101 aa14.29□□□□□ -0.12
SNRPF-204ENST00000552085 SMG7Q92540 1137 aaKnown RBP14.29□□□□□ -0.12
SNRPF-204ENST00000552085 IGSF21Q96ID5 467 aa14.29□□□□□ -0.12
SNRPF-204ENST00000552085 PCYT2Q99447 389 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms