RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 PSRC1Q6PGN9 363 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 MAEAQ7L5Y9 396 aa18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 RHPN2Q8IUC4 686 aa18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 ZNF710Q8N1W2 664 aa18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 PSPC1Q8WXF1 523 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 VWCEQ96DN2 955 aa18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 ZNF668Q96K58 619 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 SCLT1Q96NL6 688 aa18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.05■□□□□ 0.485e-10■■□□□ 13.7
CHMP1A-209ENST00000550872 CHMP5Q9NZZ3 219 aa18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 TCHHQ07283 1943 aa18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 TANC1Q9C0D5 1861 aa18.05■□□□□ 0.48
CHMP1A-209ENST00000550872 RBAK-RBAKDNI3L0D1 243 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 GPR32O75388 356 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 CYP11B2P19099 503 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 PLCG1P19174 1290 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 CRYBB1P53674 252 aaPredicted RBP18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 CDC42EP1Q00587 391 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 LPIN1Q14693 890 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 SHHQ15465 462 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 FBXO47Q5MNV8 452 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 C9orf50Q5SZB4 431 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 PRPF31Q8WWY3 499 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 NLRP7Q8WX94 980 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 IPO9Q96P70 1041 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 SCAND2PQ9GZW5 306 aaPredicted RBP18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 ARID2Q68CP9 1835 aa18.04■□□□□ 0.48
CHMP1A-209ENST00000550872 ASAP2O43150 1006 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 PLA2G4BP0C869 781 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 ACTN1P12814 892 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 GPC3P51654 580 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 AXDND1Q5T1B0 1012 aaPredicted RBP18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 RRAGBQ5VZM2 374 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 OTOP2Q7RTS6 562 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 MCPH1Q8NEM0 835 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 DBF4BQ8NFT6 615 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 SEPT8Q92599 483 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 OSMRQ99650 979 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 PANK2Q9BZ23 570 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 ADAMTS10Q9H324 1103 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 COL4A3BPQ9Y5P4 624 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 SQORQ9Y6N5 450 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 DNAH12Q6ZR08 3092 aa18.03■□□□□ 0.48
CHMP1A-209ENST00000550872 LAMTOR4Q0VGL1 99 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 DHX8Q14562 1220 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 PLEKHG4Q58EX7 1191 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 FAM102BQ5T8I3 360 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 CNKSR3Q6P9H4 555 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 SHC4Q6S5L8 630 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 TSHZ1Q6ZSZ6 1077 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 KSR1Q8IVT5 923 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 TDHQ8IZJ6 230 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 SYT2Q8N9I0 419 aaPredicted RBP18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 USP38Q8NB14 1042 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 RNPC3Q96LT9 517 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 NLRP4Q96MN2 994 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 IFIH1Q9BYX4 1025 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 POLR3FQ9H1D9 316 aaPredicted RBP18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 AGO3Q9H9G7 860 aaKnown RBP18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 GPRC5CQ9NQ84 441 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 BLOC1S4Q9NUP1 217 aa18.02■□□□□ 0.48
CHMP1A-209ENST00000550872 A0A087WZ62 844 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 ZBBXA8MT70 800 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 RPS6KA5O75582 802 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 SRGAP2CP0DJJ0 459 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 CD52P31358 61 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 ARL2P36404 184 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 MXD4Q14582 209 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 RINT1Q6NUQ1 792 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 CCDC73Q6ZRK6 1079 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 ZNF410Q86VK4 478 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 PDILTQ8N807 584 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 ASAP3Q8TDY4 903 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 LRRC15Q8TF66 581 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 TMEM40Q8WWA1 233 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 HERVK_113Q902F9 699 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 RAD54LQ92698 747 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 FDXACB1Q9BRP7 624 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 RUSC1Q9BVN2 902 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 GCOM2Q9BZD3 368 aaPredicted RBP18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 MTIF3Q9H2K0 278 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 GDPD2Q9HCC8 539 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 POLD4Q9HCU8 107 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 FAM13BQ9NYF5 915 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 NOC2LQ9Y3T9 749 aaKnown RBP18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 LOXHD1Q8IVV2 1947 aa18.01■□□□□ 0.47
CHMP1A-209ENST00000550872 DARSP14868 501 aaKnown RBP18■□□□□ 0.47
CHMP1A-209ENST00000550872 EIF4BP23588 611 aaKnown RBP18■□□□□ 0.47
CHMP1A-209ENST00000550872 STAT6P42226 847 aa18■□□□□ 0.47
CHMP1A-209ENST00000550872 SLC12A3P55017 1021 aa18■□□□□ 0.47
CHMP1A-209ENST00000550872 NFX1Q12986 1120 aaKnown RBP18■□□□□ 0.47
CHMP1A-209ENST00000550872 PAK2Q13177 524 aa18■□□□□ 0.47
CHMP1A-209ENST00000550872 IKBKEQ14164 716 aa18■□□□□ 0.47
CHMP1A-209ENST00000550872 TFDP1Q14186 410 aa18■□□□□ 0.47
CHMP1A-209ENST00000550872 MCM6Q14566 821 aa18■□□□□ 0.47
CHMP1A-209ENST00000550872 TCTN1Q2MV58 587 aa18■□□□□ 0.47
CHMP1A-209ENST00000550872 ODR4Q5SWX8 454 aa18■□□□□ 0.47
CHMP1A-209ENST00000550872 GPR153Q6NV75 609 aa18■□□□□ 0.47
CHMP1A-209ENST00000550872 C1orf186Q6ZWK4 172 aa18■□□□□ 0.47
CHMP1A-209ENST00000550872 RNF149Q8NC42 400 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms