RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 SOX6P35712 828 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 CCT5P48643 541 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 ZNF165P49910 485 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 GSDMDP57764 484 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 KCNC4Q03721 635 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 UBXN1Q04323 297 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 ITPRIPL1Q6GPH6 555 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 SHQ1Q6PI26 577 aaKnown RBP6.99□□□□□ -1.29
LINC02388-201ENST00000550678 CWC27Q6UX04 472 aaKnown RBP6.99□□□□□ -1.29
LINC02388-201ENST00000550678 RBM43Q6ZSC3 357 aaKnown RBP6.99□□□□□ -1.29
LINC02388-201ENST00000550678 LSMEM2Q8N112 164 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 ZNF454Q8N9F8 522 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 NKX2-3Q8TAU0 364 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 TRPC4APQ8TEL6 797 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 OSBP2Q969R2 916 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 FAM167AQ96KS9 214 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 CHCHD6Q9BRQ6 235 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 TMEM121BQ9BXQ6 578 aaPredicted RBP6.99□□□□□ -1.29
LINC02388-201ENST00000550678 LIN28AQ9H9Z2 209 aaKnown RBP6.99□□□□□ -1.29
LINC02388-201ENST00000550678 VPS18Q9P253 973 aa6.99□□□□□ -1.29
LINC02388-201ENST00000550678 ZNF804BA4D1E1 1349 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 TTC21BQ7Z4L5 1316 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 ANKRD65E5RJM6 399 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 WASLO00401 505 aaPredicted RBP6.98□□□□□ -1.29
LINC02388-201ENST00000550678 VWA5AO00534 786 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 PMM2O15305 246 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 YKT6O15498 198 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 HSPA4LO95757 839 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 MCM3P25205 808 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 KCNJ6P48051 423 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 DNM1Q05193 864 aaKnown RBP6.98□□□□□ -1.29
LINC02388-201ENST00000550678 KIF5AQ12840 1032 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 CAMK4Q16566 473 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 GEN1Q17RS7 908 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 C6orf132Q5T0Z8 1188 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 E4F1Q66K89 784 aaPredicted RBP6.98□□□□□ -1.29
LINC02388-201ENST00000550678 ALKBH5Q6P6C2 394 aaKnown RBP6.98□□□□□ -1.29
LINC02388-201ENST00000550678 SPATA24Q86W54 205 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 VSIG1Q86XK7 387 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 CEP57Q86XR8 500 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 SUPT20HQ8NEM7 779 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 CHAC2Q8WUX2 184 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 ATP6V0A1Q93050 837 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 DHX58Q96C10 678 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 WDR24Q96S15 920 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 ADPGKQ9BRR6 497 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 FSD1Q9BTV5 496 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 NIF3L1Q9GZT8 377 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 LMAN2LQ9H0V9 348 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 EHD1Q9H4M9 534 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 CLK4Q9HAZ1 481 aaKnown RBP6.98□□□□□ -1.29
LINC02388-201ENST00000550678 FAM198AQ9UFP1 575 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 ADAMTS1Q9UHI8 967 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 TSR3Q9UJK0 312 aaKnown RBP6.98□□□□□ -1.29
LINC02388-201ENST00000550678 PALD1Q9ULE6 856 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 PCDHB3Q9Y5E6 796 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 TTC41PQ6P2S7 1318 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 SHANK2Q9UPX8 1470 aa6.98□□□□□ -1.29
LINC02388-201ENST00000550678 USP31Q70CQ4 1352 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 HDAC3O15379 428 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 SRGAP3O43295 1099 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 RIPK2O43353 540 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 TSC22D2O75157 780 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 ERLIN2O94905 339 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 ATP5BP06576 529 aaKnown RBP6.97□□□□□ -1.29
LINC02388-201ENST00000550678 TFEBP19484 476 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 NLRP5P59047 1200 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 ETF1P62495 437 aaKnown RBP6.97□□□□□ -1.29
LINC02388-201ENST00000550678 PHEXP78562 749 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 FUT2Q10981 343 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 NR5A1Q13285 461 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 BYSLQ13895 437 aaKnown RBP6.97□□□□□ -1.29
LINC02388-201ENST00000550678 MAP7Q14244 749 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 GNA13Q14344 377 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 LONRF2Q1L5Z9 754 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 TRIM71Q2Q1W2 868 aaKnown RBP6.97□□□□□ -1.29
LINC02388-201ENST00000550678 TMEM92Q6UXU6 159 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 PLEKHM3Q6ZWE6 761 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 MFN1Q8IWA4 741 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 TPH2Q8IWU9 490 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 ZBTB8BQ8NAP8 495 aaPredicted RBP6.97□□□□□ -1.29
LINC02388-201ENST00000550678 CTCFLQ8NI51 663 aaPredicted RBP6.97□□□□□ -1.29
LINC02388-201ENST00000550678 RNF139Q8WU17 664 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 PTCD2Q8WV60 388 aaKnown RBP6.97□□□□□ -1.29
LINC02388-201ENST00000550678 RUFY2Q8WXA3 655 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 KAT2BQ92831 832 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 DCBLD2Q96PD2 775 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 ASB2Q96Q27 587 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 YIPF4Q9BSR8 244 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 LSM14BQ9BX40 385 aaKnown RBP6.97□□□□□ -1.29
LINC02388-201ENST00000550678 CARD6Q9BX69 1037 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 GBP3Q9H0R5 595 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 CLSTN2Q9H4D0 955 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 CYP4F12Q9HCS2 524 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 COPRSQ9NQ92 184 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 DDX19AQ9NUU7 478 aaKnown RBP6.97□□□□□ -1.29
LINC02388-201ENST00000550678 MTRF1LQ9UGC7 380 aaKnown RBP6.97□□□□□ -1.29
LINC02388-201ENST00000550678 DNAI1Q9UI46 699 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 TRIM35Q9UPQ4 493 aa6.97□□□□□ -1.29
LINC02388-201ENST00000550678 USP16Q9Y5T5 823 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms