RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PNMA8AQ86V59 439 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-213ENST00000550629 C1QL4Q86Z23 238 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 TAB3Q8N5C8 712 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-213ENST00000550629 RBBP8NLQ8NC74 664 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-213ENST00000550629 TM9SF2Q99805 663 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 NOL10Q9BSC4 688 aaKnown RBP6.85□□□□□ -1.31
SCAF11-213ENST00000550629 MXD3Q9BW11 206 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 FOXP3Q9BZS1 431 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 MYOZ2Q9NPC6 264 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 ADARB2Q9NS39 739 aaKnown RBP6.85□□□□□ -1.31
SCAF11-213ENST00000550629 SUCOQ9UBS9 1254 aaKnown RBP6.85□□□□□ -1.31
SCAF11-213ENST00000550629 HACL1Q9UJ83 578 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 EFR3BQ9Y2G0 817 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 CHD4Q14839 1912 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 RPAP1Q9BWH6 1393 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-213ENST00000550629 UTRNP46939 3433 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 CCDC88AQ3V6T2 1871 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 C9IYK1 514 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 MYO1BO43795 1136 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 C1QTNF9P0C862 333 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 VEGFAP15692 232 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-213ENST00000550629 GNAT2P19087 354 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 AUHQ13825 339 aaKnown RBP6.84□□□□□ -1.31
SCAF11-213ENST00000550629 COL9A2Q14055 689 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-213ENST00000550629 ZYXQ15942 572 aaKnown RBP6.84□□□□□ -1.31
SCAF11-213ENST00000550629 MCMDC2Q4G0Z9 681 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 APOBEC3HQ6NTF7 200 aaKnown RBP6.84□□□□□ -1.31
SCAF11-213ENST00000550629 RNF111Q6ZNA4 994 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 USP50Q70EL3 339 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-213ENST00000550629 LSRQ86X29 649 aaPredicted RBP6.84□□□□□ -1.31
SCAF11-213ENST00000550629 OXR1Q8N573 874 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 DHRS1Q96LJ7 313 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 RIOK1Q9BRS2 568 aaKnown RBP6.84□□□□□ -1.31
SCAF11-213ENST00000550629 EPB41L4BQ9H329 900 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 GFOD1Q9NXC2 390 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 FBXL21Q9UKT6 434 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 TCFL5Q9UL49 500 aa6.84□□□□□ -1.31
SCAF11-213ENST00000550629 SCN4AP35499 1836 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 FITM1A5D6W6 292 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 F8W031 263 aaPredicted RBP6.83□□□□□ -1.32
SCAF11-213ENST00000550629 EPB41L2O43491 1005 aaKnown RBP6.83□□□□□ -1.32
SCAF11-213ENST00000550629 RPL10P27635 214 aaKnown RBP6.83□□□□□ -1.32
SCAF11-213ENST00000550629 EPHX2P34913 555 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 BTDP43251 543 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 SOX9P48436 509 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 RBM5P52756 815 aaKnown RBP eCLIP6.83□□□□□ -1.32
SCAF11-213ENST00000550629 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
SCAF11-213ENST00000550629 PCBP3P57721 371 aaKnown RBP6.83□□□□□ -1.32
SCAF11-213ENST00000550629 CFAP100Q494V2 611 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 TIGD5Q53EQ6 642 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 GIMAP6Q6P9H5 292 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 LILRA6Q6PI73 481 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 UNC5AQ6ZN44 842 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 ADGRA1Q86SQ6 560 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 SIAH1Q8IUQ4 282 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 RASGRP4Q8TDF6 673 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 LINC01599Q8WXQ3 324 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 OSBP2Q969R2 916 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 GPRASP2Q96D09 838 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 STRBPQ96SI9 672 aaKnown RBP6.83□□□□□ -1.32
SCAF11-213ENST00000550629 G6PC3Q9BUM1 346 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 IDI2Q9BXS1 227 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 CRNKL1Q9BZJ0 848 aaKnown RBP6.83□□□□□ -1.32
SCAF11-213ENST00000550629 TAF1DQ9H5J8 278 aaPredicted RBP6.83□□□□□ -1.32
SCAF11-213ENST00000550629 CHST7Q9NS84 486 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 ATP8A2Q9NTI2 1148 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 TMOD2Q9NZR1 351 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 PGAP2Q9UHJ9 254 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 PCDHB12Q9Y5F1 795 aa6.83□□□□□ -1.32
SCAF11-213ENST00000550629 COL2A1P02458 1487 aaPredicted RBP6.83□□□□□ -1.32
SCAF11-213ENST00000550629 ZMYM6O95789 1325 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 CCDC171Q6TFL3 1326 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 A0A0D9SFI3 127 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 TMEM82A0PJX8 343 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 MEIS1O00470 390 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 WNT10BO00744 389 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 SGSM2O43147 1006 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 GPAA1O43292 621 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 ENTPD3O75355 529 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 REC8O95072 547 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 MBD4O95243 580 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 SYPP08247 313 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 TMEM253P0C7T8 217 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 GUCY2CP25092 1073 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 EPS15P42566 896 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 RHBDL3P58872 404 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 DUSP4Q13115 394 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 TNFAIP1Q13829 316 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 NR0B2Q15466 257 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 BBS9Q3SYG4 887 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 TDRD10Q5VZ19 366 aaKnown RBP6.82□□□□□ -1.32
SCAF11-213ENST00000550629 CDC42EP5Q6NZY7 148 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 CWC27Q6UX04 472 aaKnown RBP6.82□□□□□ -1.32
SCAF11-213ENST00000550629 FAM83AQ86UY5 434 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 PPFIBP1Q86W92 1011 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 APOBEC3FQ8IUX4 373 aaKnown RBP6.82□□□□□ -1.32
SCAF11-213ENST00000550629 LILRA2Q8N149 483 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 MIGA1Q8NAN2 632 aa6.82□□□□□ -1.32
SCAF11-213ENST00000550629 PRMT6Q96LA8 375 aaPredicted RBP6.82□□□□□ -1.32
SCAF11-213ENST00000550629 SPATA32Q96LK8 384 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms