RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 BARHL2Q9NY43 387 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 BCS1LQ9Y276 419 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 PRPHP41219 470 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 RPL21P46778 160 aaKnown RBP13.07□□□□□ -0.32
VDR-208ENST00000550325 CALCOCO2Q13137 446 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 ANO7Q6IWH7 933 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 EXOC3L1Q86VI1 746 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 EIF1ADQ8N9N8 165 aaKnown RBP13.07□□□□□ -0.32
VDR-208ENST00000550325 PITPNM3Q9BZ71 974 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 ZBTB1Q9Y2K1 713 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 AKAP11Q9UKA4 1901 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 CLIC2O15247 247 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 AHCYL1O43865 530 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 GNA11P29992 359 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 GNAQP50148 359 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 PPP1R15BQ5SWA1 713 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 GPBP1Q86WP2 473 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 TTC8Q8TAM2 541 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 DCP1AQ9NPI6 582 aaPredicted RBP13.07□□□□□ -0.32
VDR-208ENST00000550325 METTL5Q9NRN9 209 aaKnown RBP13.07□□□□□ -0.32
VDR-208ENST00000550325 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 PCDH11XQ9BZA7 1347 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 PCDH11YQ9BZA8 1340 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 SLC37A4O43826 429 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 XRCC5P13010 732 aaKnown RBP13.07□□□□□ -0.32
VDR-208ENST00000550325 KLC1Q07866 573 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 AUHQ13825 339 aaKnown RBP13.07□□□□□ -0.32
VDR-208ENST00000550325 ZC3H18Q86VM9 953 aaKnown RBP13.07□□□□□ -0.32
VDR-208ENST00000550325 COA7Q96BR5 231 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 SYT15Q9BQS2 421 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 AIPL1Q9NZN9 384 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 CTTNBP2NLQ9P2B4 639 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 SUCLA2Q9P2R7 463 aaPredicted RBP13.07□□□□□ -0.32
VDR-208ENST00000550325 KIAA1024Q9UPX6 916 aa13.07□□□□□ -0.32
VDR-208ENST00000550325 ENTPD5O75356 428 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 CWF19L1Q69YN2 538 aaKnown RBP13.06□□□□□ -0.32
VDR-208ENST00000550325 CCDC65Q8IXS2 484 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 NAP1L3Q99457 506 aaPredicted RBP13.06□□□□□ -0.32
VDR-208ENST00000550325 GCNT4Q9P109 453 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 ASIC3Q9UHC3 531 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 LAMB4A4D0S4 1761 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 CAPN12Q6ZSI9 719 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 RFX8Q6ZV50 586 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 IRF2BP2Q7Z5L9 587 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 B4GALNT2Q8NHY0 566 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 PIGOQ8TEQ8 1089 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 DNAJC9Q8WXX5 260 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 PIGSQ96S52 555 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 BRIP1Q9BX63 1249 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 VCXQ9H320 206 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 RXFP1Q9HBX9 757 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 RCN2Q14257 317 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 DUPD1Q68J44 220 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
VDR-208ENST00000550325 DTX3LQ8TDB6 740 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 SH3RF3Q8TEJ3 882 aaPredicted RBP13.06□□□□□ -0.32
VDR-208ENST00000550325 POP1Q99575 1024 aaKnown RBP13.06□□□□□ -0.32
VDR-208ENST00000550325 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 ARHGEF3Q9NR81 526 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 STK17AQ9UEE5 414 aa13.06□□□□□ -0.32
VDR-208ENST00000550325 LRP6O75581 1613 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 LRRN2O75325 713 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 SPAG7O75391 227 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 FESP07332 822 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 EPHB2P29323 1055 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 PTENP60484 403 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 KLRC3Q07444 240 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 MESDQ14696 234 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 CCDC137Q6PK04 289 aaKnown RBP13.05□□□□□ -0.32
VDR-208ENST00000550325 APBB1IPQ7Z5R6 666 aaPredicted RBP13.05□□□□□ -0.32
VDR-208ENST00000550325 PROM2Q8N271 834 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 RBM46Q8TBY0 533 aaKnown RBP13.05□□□□□ -0.32
VDR-208ENST00000550325 GANQ9H2C0 597 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 EPB41L4BQ9H329 900 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
VDR-208ENST00000550325 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 AFPP02771 609 aaKnown RBP13.05□□□□□ -0.32
VDR-208ENST00000550325 STAT1P42224 750 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 USP4Q13107 963 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 MAPK7Q13164 816 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 C10orf76Q5T2E6 689 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 TRIM59Q8IWR1 403 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 UCMAQ8WVF2 138 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 MYLK2Q9H1R3 596 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 TXLNGQ9NUQ3 528 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 RPTORQ8N122 1335 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 DDX3XO00571 662 aaKnown RBP eCLIP13.05□□□□□ -0.32
VDR-208ENST00000550325 KIAA0391O15091 583 aaKnown RBP13.05□□□□□ -0.32
VDR-208ENST00000550325 RIPK2O43353 540 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 NUDT17P0C025 328 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 TNFAIP3P21580 790 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 CCDC152Q4G0S7 254 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 TEX9Q8N6V9 391 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 RNPEPL1Q9HAU8 725 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 ZDHHC18Q9NUE0 388 aa13.05□□□□□ -0.32
VDR-208ENST00000550325 BZW2Q9Y6E2 419 aaKnown RBP13.05□□□□□ -0.32
VDR-208ENST00000550325 MYH1P12882 1939 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms