RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 FAM110CQ1W6H9 321 aa12.65□□□□□ -0.38
VDR-206ENST00000549336 CCDC26Q8TAB7 109 aa12.65□□□□□ -0.38
VDR-206ENST00000549336 ACAP3Q96P50 834 aa12.65□□□□□ -0.38
VDR-206ENST00000549336 ZMYND15Q9H091 742 aa12.65□□□□□ -0.38
VDR-206ENST00000549336 ZDHHC9Q9Y397 364 aa12.65□□□□□ -0.38
VDR-206ENST00000549336 STRCP1A6NGW2 1772 aa12.65□□□□□ -0.38
VDR-206ENST00000549336 IGSF9BQ9UPX0 1349 aa12.65□□□□□ -0.39
VDR-206ENST00000549336 TOMM70O94826 608 aa12.65□□□□□ -0.39
VDR-206ENST00000549336 TBXAS1P24557 533 aaPredicted RBP12.65□□□□□ -0.39
VDR-206ENST00000549336 EFCAB12Q6NXP0 572 aa12.65□□□□□ -0.39
VDR-206ENST00000549336 PPP2R3CQ969Q6 453 aa12.65□□□□□ -0.39
VDR-206ENST00000549336 LRRC4Q9HBW1 653 aa12.65□□□□□ -0.39
VDR-206ENST00000549336 A0A087WWV3 80 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 FSD2A1L4K1 749 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 NDC80O14777 642 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 DUOXA2Q1HG44 320 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 CCDC14Q49A88 953 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 TCP11X2Q5H9J9 407 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 PEX26Q7Z412 305 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.64□□□□□ -0.39
VDR-206ENST00000549336 MICAL1Q8TDZ2 1067 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 NMRK2Q9NPI5 230 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 MYO1AQ9UBC5 1043 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 FEZ2Q9UHY8 353 aaPredicted RBP12.64□□□□□ -0.39
VDR-206ENST00000549336 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 THAP12O43422 761 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 NOL9Q5SY16 702 aaKnown RBP12.64□□□□□ -0.39
VDR-206ENST00000549336 SPRYD7Q5W111 196 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 RSRC2Q7L4I2 434 aaKnown RBP12.64□□□□□ -0.39
VDR-206ENST00000549336 NAPGQ99747 312 aaPredicted RBP12.64□□□□□ -0.39
VDR-206ENST00000549336 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 LOC102724159A0A0B4J2E5 919 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 PPFIA4O75335 1185 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 PRCPP42785 496 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 ZBED6P86452 979 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 TSPY1Q01534 308 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 CALCOCO2Q13137 446 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 PWP2Q15269 919 aaKnown RBP12.64□□□□□ -0.39
VDR-206ENST00000549336 ELOA2Q8IYF1 753 aaPredicted RBP12.64□□□□□ -0.39
VDR-206ENST00000549336 TMEM143Q96AN5 459 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 BPIFA3Q9BQP9 254 aa12.64□□□□□ -0.39
VDR-206ENST00000549336 UBE2TQ9NPD8 197 aaPredicted RBP12.64□□□□□ -0.39
VDR-206ENST00000549336 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 ABL1P00519 1130 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 C11orf57Q6ZUT1 292 aaPredicted RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 ENOSF1Q7L5Y1 443 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 C4orf19Q8IY42 314 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 TRIM58Q8NG06 486 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 GCNAQ96QF7 691 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 PPP1R9BQ96SB3 815 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 AGO4Q9HCK5 861 aaKnown RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 CYP26B1Q9NR63 512 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 RBAKQ9NYW8 714 aaPredicted RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 CABYRO75952 493 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 CDC25BP30305 580 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 VAMP7P51809 220 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 RPS6KA1Q15418 735 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 KRT39Q6A163 491 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 SYT2Q8N9I0 419 aaPredicted RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.63□□□□□ -0.39
VDR-206ENST00000549336 CLMNQ96JQ2 1002 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 TSNARE1Q96NA8 513 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 MTG1Q9BT17 334 aaPredicted RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 GOLPH3LQ9H4A5 285 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 HAUS4Q9H6D7 363 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 AMFRQ9UKV5 643 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 USTQ9Y2C2 406 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 ATRNL1Q5VV63 1379 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 EIF3DO15371 548 aaKnown RBP eCLIP12.63□□□□□ -0.39
VDR-206ENST00000549336 CYP3A4P08684 503 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 ADKP55263 362 aaKnown RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 MAP2K5Q13163 448 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 ZNF699Q32M78 642 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 MOB2Q70IA6 237 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 CATSPER3Q86XQ3 398 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 REEP2Q9BRK0 252 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 TINF2Q9BSI4 451 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 STARD7Q9NQZ5 370 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 SLC38A7Q9NVC3 462 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 MTRF1LQ9UGC7 380 aaKnown RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 FZD1Q9UP38 647 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 SSX2IPQ9Y2D8 614 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 DAAM1Q9Y4D1 1078 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 TYW5A2RUC4 315 aaKnown RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 ARP10275 920 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 ATP2A2P16615 1042 aaKnown RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 CIITAP33076 1130 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 ACVR2BQ13705 512 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 PPP1R7Q15435 360 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 TAF3Q5VWG9 929 aa12.63□□□□□ -0.39
VDR-206ENST00000549336 GABPB2Q8TAK5 448 aaPredicted RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 MRPL47Q9HD33 250 aaKnown RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 SAMSN1Q9NSI8 373 aaKnown RBP12.63□□□□□ -0.39
VDR-206ENST00000549336 H3BRB1 525 aa12.62□□□□□ -0.39
VDR-206ENST00000549336 RHOBTB3O94955 611 aa12.62□□□□□ -0.39
VDR-206ENST00000549336 C10orf76Q5T2E6 689 aa12.62□□□□□ -0.39
VDR-206ENST00000549336 TAX1BP1Q86VP1 789 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms