RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 PSMD2Q13200 908 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 DMP1Q13316 513 aaPredicted RBP10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 BFSP2Q13515 415 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 HSP90AA2PQ14568 343 aaPredicted RBP10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 SNX17Q15036 470 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 PCBP1Q15365 356 aaKnown RBP eCLIP10.82□□□□□ -0.683e-7■■■■■ 30.1
SMARCD1-206ENST00000549274 NFKBIBQ15653 356 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 PTGISQ16647 500 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 EFCAB12Q6NXP0 572 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 MTHFD1LQ6UB35 978 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 SLC39A5Q6ZMH5 540 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 C1orf186Q6ZWK4 172 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 ANKRD33Q7Z3H0 272 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 KCNK18Q7Z418 384 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 SH3RF1Q7Z6J0 888 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 ZNF410Q86VK4 478 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 TNS4Q8IZW8 715 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 METTL13Q8N6R0 699 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 TRIML1Q8N9V2 468 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 DDX12PQ92771 950 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 SMARCE1Q969G3 411 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 PAGE5Q96GU1 130 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 ABHD8Q96I13 439 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 GSDMAQ96QA5 445 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 PANK2Q9BZ23 570 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 TRIM9Q9C026 710 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 INO80BQ9C086 356 aaPredicted RBP10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 C2orf40Q9H1Z8 148 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 CLSTN2Q9H4D0 955 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 EXOC1Q9NV70 894 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 SETD4Q9NVD3 440 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 TELO2Q9Y4R8 837 aa10.82□□□□□ -0.68
SMARCD1-206ENST00000549274 ZBTB42B2RXF5 422 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 CYP2C9P11712 490 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 PTGS1P23219 599 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 NAMPTP43490 491 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 CDK7P50613 346 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 EFNA5P52803 228 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 NPEPPSP55786 919 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 DHX8Q14562 1220 aaKnown RBP10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 KCNB1Q14721 858 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 FAM102BQ5T8I3 360 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 UNC13DQ70J99 1090 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 TRMT1LQ7Z2T5 733 aaKnown RBP10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 SERINC5Q86VE9 423 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 ZBTB8OSQ8IWT0 167 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 HVCN1Q96D96 273 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 PDLIM7Q9NR12 457 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 AKT3Q9Y243 479 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 UBE4BO95155 1302 aa10.81□□□□□ -0.68
SMARCD1-206ENST00000549274 MYMKA6NI61 221 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 PLS3P13797 630 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 IDEP14735 1019 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 AFMP43652 599 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 PHKA2P46019 1235 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 ZNF131P52739 623 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 IRX5P78411 483 aaPredicted RBP10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 RBL2Q08999 1139 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 NCBP1Q09161 790 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 STIM1Q13586 685 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 GDF6Q6KF10 455 aaPredicted RBP10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 PLCD3Q8N3E9 789 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 USP38Q8NB14 1042 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 GPT2Q8TD30 523 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 SPIRE2Q8WWL2 714 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 KCNN1Q92952 543 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 PAWRQ96IZ0 340 aaKnown RBP10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 CEP89Q96ST8 783 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 REEP2Q9BRK0 252 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 NFKBIZQ9BYH8 718 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 OLFML3Q9NRN5 406 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 PANK4Q9NVE7 773 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 SUCLA2Q9P2R7 463 aaPredicted RBP10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 DACH1Q9UI36 760 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 SQORQ9Y6N5 450 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 BRCA2P51587 3418 aa10.8□□□□□ -0.68
SMARCD1-206ENST00000549274 FRMD3A2A2Y4 597 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 TREHO43280 583 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 TRAK2O60296 914 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 HIP1RO75146 1068 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 RPN1P04843 607 aaKnown RBP10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 ARL2P36404 184 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 DPYDQ12882 1025 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 GIT2Q14161 759 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 ARSHQ5FYA8 562 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 HERC4Q5GLZ8 1057 aaPredicted RBP10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 CT47A1Q5JQC4 288 aaPredicted RBP10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 MARCH8Q5T0T0 291 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 COL13A1Q5TAT6 717 aaPredicted RBP10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 DYMQ7RTS9 669 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 APBB1IPQ7Z5R6 666 aaPredicted RBP10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 SRGAP1Q7Z6B7 1085 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 FAM178BQ8IXR5 827 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 FAM126BQ8IXS8 530 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 MYCT1Q8N699 235 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 LINC01465Q8N7H1 131 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 DEPTORQ8TB45 409 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 DNAJC19Q96DA6 116 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 SCLT1Q96NL6 688 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 RUSC1Q9BVN2 902 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms