RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 TMEM109Q9BVC6 243 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.03■■□□□ 1.6
NPAS3-206ENST00000548645 C15orf41Q9Y2V0 281 aa25.03■■□□□ 1.6
NPAS3-206ENST00000548645 GTPBP10A4D1E9 387 aaKnown RBP25.02■■□□□ 1.6
NPAS3-206ENST00000548645 SLC16A3O15427 465 aaKnown RBP25.02■■□□□ 1.6
NPAS3-206ENST00000548645 SF3A3Q12874 501 aaKnown RBP eCLIP25.02■■□□□ 1.6
NPAS3-206ENST00000548645 SLMAPQ14BN4 828 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 ERVK-5Q9HDB9 667 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 MTRF1LQ9UGC7 380 aaKnown RBP25.02■■□□□ 1.6
NPAS3-206ENST00000548645 IRS2Q9Y4H2 1338 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 EVI5O60447 810 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 PDE6CP51160 858 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 GJB7Q6PEY0 223 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 SLC35C1Q96A29 364 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 RTFDC1Q9BY42 306 aaPredicted RBP25.02■■□□□ 1.6
NPAS3-206ENST00000548645 PARP2Q9UGN5 583 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 COPB2P35606 906 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 GRIK5Q16478 980 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 TAOK1Q7L7X3 1001 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 TBC1D22AQ8WUA7 517 aa25.02■■□□□ 1.6
NPAS3-206ENST00000548645 ECM2O94769 699 aaPredicted RBP25.01■■□□□ 1.59
NPAS3-206ENST00000548645 ANP32DO95626 131 aa25.01■■□□□ 1.59
NPAS3-206ENST00000548645 EPM2AIP1Q7L775 607 aaPredicted RBP25.01■■□□□ 1.59
NPAS3-206ENST00000548645 GLYCTKQ8IVS8 523 aa25.01■■□□□ 1.59
NPAS3-206ENST00000548645 RPTORQ8N122 1335 aa25.01■■□□□ 1.59
NPAS3-206ENST00000548645 NR3C1P04150 777 aa25.01■■□□□ 1.59
NPAS3-206ENST00000548645 BTDP43251 543 aa25.01■■□□□ 1.59
NPAS3-206ENST00000548645 EP400NLQ6ZTU2 488 aa25.01■■□□□ 1.59
NPAS3-206ENST00000548645 ACSBG1Q96GR2 724 aa25.01■■□□□ 1.59
NPAS3-206ENST00000548645 GPCPD1Q9NPB8 672 aa25.01■■□□□ 1.59
NPAS3-206ENST00000548645 ABCF3Q9NUQ8 709 aa25.01■■□□□ 1.59
NPAS3-206ENST00000548645 TYW1Q9NV66 732 aaKnown RBP25.01■■□□□ 1.59
NPAS3-206ENST00000548645 KRT13P13646 458 aa25■■□□□ 1.59
NPAS3-206ENST00000548645 NQO1P15559 274 aaKnown RBP25■■□□□ 1.59
NPAS3-206ENST00000548645 HOXD13P35453 343 aa25■■□□□ 1.59
NPAS3-206ENST00000548645 SOX5P35711 763 aa25■■□□□ 1.59
NPAS3-206ENST00000548645 GIT2Q14161 759 aa25■■□□□ 1.59
NPAS3-206ENST00000548645 SFR1Q86XK3 245 aa25■■□□□ 1.59
NPAS3-206ENST00000548645 NOP53Q9NZM5 478 aaKnown RBP25■■□□□ 1.59
NPAS3-206ENST00000548645 SNX3O60493 162 aa25■■□□□ 1.59
NPAS3-206ENST00000548645 MED24O75448 989 aa25■■□□□ 1.59
NPAS3-206ENST00000548645 ABCB4P21439 1286 aa25■■□□□ 1.59
NPAS3-206ENST00000548645 SEMA4AQ9H3S1 761 aa25■■□□□ 1.59
NPAS3-206ENST00000548645 JMJD4Q9H9V9 463 aa25■■□□□ 1.59
NPAS3-206ENST00000548645 DDX60LQ5H9U9 1706 aaKnown RBP25■■□□□ 1.59
NPAS3-206ENST00000548645 HSPA6P17066 643 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 IFNAR2P48551 515 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 THOC1Q96FV9 657 aaKnown RBP24.99■■□□□ 1.59
NPAS3-206ENST00000548645 NYXQ9GZU5 481 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 MTFR1LQ9H019 292 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 KCNMB3Q9NPA1 279 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 AGAP1Q9UPQ3 857 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 ALADP13716 330 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 CHRNA3P32297 505 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 ZNF131P52739 623 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 ZNF211Q13398 564 aaPredicted RBP24.99■■□□□ 1.59
NPAS3-206ENST00000548645 KIRREL3Q8IZU9 778 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 GRHL1Q9NZI5 618 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 L3MBTL1Q9Y468 752 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 POTEFA5A3E0 1075 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 PODXLO00592 558 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 PHF2O75151 1096 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 UBOX5O94941 541 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 POTEIP0CG38 1075 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 SNHG28P0DPA3 235 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 CNGA2Q16280 664 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 POTEGQ6S5H5 508 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 POTEEQ6S8J3 1075 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 GBP7Q8N8V2 638 aaPredicted RBP24.99■■□□□ 1.59
NPAS3-206ENST00000548645 AGAP11Q8TF27 550 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 L3MBTL3Q96JM7 780 aaPredicted RBP24.99■■□□□ 1.59
NPAS3-206ENST00000548645 UIMC1Q96RL1 719 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 PSTPIP2Q9H939 334 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 MTMR4Q9NYA4 1195 aa24.99■■□□□ 1.59
NPAS3-206ENST00000548645 RASGRF2O14827 1237 aa24.98■■□□□ 1.59
NPAS3-206ENST00000548645 LRRC47Q8N1G4 583 aaKnown RBP24.98■■□□□ 1.59
NPAS3-206ENST00000548645 HOMER3Q9NSC5 361 aa24.98■■□□□ 1.59
NPAS3-206ENST00000548645 USP15Q9Y4E8 981 aaPredicted RBP24.98■■□□□ 1.59
NPAS3-206ENST00000548645 IGSF9BQ9UPX0 1349 aa24.98■■□□□ 1.59
NPAS3-206ENST00000548645 PTGIRP43119 386 aa24.98■■□□□ 1.59
NPAS3-206ENST00000548645 CASP4P49662 377 aa24.98■■□□□ 1.59
NPAS3-206ENST00000548645 NCALDP61601 193 aa24.98■■□□□ 1.59
NPAS3-206ENST00000548645 ADGRF4Q8IZF3 695 aa24.98■■□□□ 1.59
NPAS3-206ENST00000548645 OLIG1Q8TAK6 271 aa24.98■■□□□ 1.59
NPAS3-206ENST00000548645 EPS8L3Q8TE67 593 aaKnown RBP24.98■■□□□ 1.59
NPAS3-206ENST00000548645 STK33Q9BYT3 514 aa24.98■■□□□ 1.59
NPAS3-206ENST00000548645 CCDC113Q9H0I3 377 aa24.98■■□□□ 1.59
NPAS3-206ENST00000548645 SYNGAP1Q96PV0 1343 aa24.97■■□□□ 1.59
NPAS3-206ENST00000548645 PPP1R12AO14974 1030 aaPredicted RBP24.97■■□□□ 1.59
NPAS3-206ENST00000548645 RARAP10276 462 aa24.97■■□□□ 1.59
NPAS3-206ENST00000548645 PLCG2P16885 1265 aa24.97■■□□□ 1.59
NPAS3-206ENST00000548645 VCAM1P19320 739 aa24.97■■□□□ 1.59
NPAS3-206ENST00000548645 PPP2R5AQ15172 486 aa24.97■■□□□ 1.59
NPAS3-206ENST00000548645 TNFAIP8L3Q5GJ75 292 aa24.97■■□□□ 1.59
NPAS3-206ENST00000548645 TBC1D9BQ66K14 1250 aa24.97■■□□□ 1.59
NPAS3-206ENST00000548645 REEP2Q9BRK0 252 aa24.97■■□□□ 1.59
NPAS3-206ENST00000548645 PPP1R11O60927 126 aaPredicted RBP24.97■■□□□ 1.59
NPAS3-206ENST00000548645 SATB1Q01826 763 aa24.97■■□□□ 1.59
NPAS3-206ENST00000548645 BMT2Q1RMZ1 405 aa24.97■■□□□ 1.59
NPAS3-206ENST00000548645 ECT2Q9H8V3 914 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms