RNA–Protein interactions for RNA: ENST00000548473.1

AC007540.1-201, humanhuman

TSL 3 BASIC

Gene AC007540.1, Length 507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007540.1-201ENST00000548473 TMEM143Q96AN5 459 aa13.37□□□□□ -0.27
AC007540.1-201ENST00000548473 TGS1Q96RS0 853 aaKnown RBP13.37□□□□□ -0.27
AC007540.1-201ENST00000548473 ADAM2Q99965 735 aa13.37□□□□□ -0.27
AC007540.1-201ENST00000548473 DHX33Q9H6R0 707 aaKnown RBP13.37□□□□□ -0.27
AC007540.1-201ENST00000548473 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
AC007540.1-201ENST00000548473 PPME1Q9Y570 386 aa13.37□□□□□ -0.27
AC007540.1-201ENST00000548473 A0A087WZ62 844 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 DENND3A2RUS2 1198 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 RFC5P40937 340 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 CDC42EP1Q00587 391 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 RILPL1Q5EBL4 403 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 CATSPER3Q86XQ3 398 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 ERMNQ8TAM6 284 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 PPM1EQ8WY54 764 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 FDXACB1Q9BRP7 624 aaPredicted RBP13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 C17orf80Q9BSJ5 609 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 GCOM2Q9BZD3 368 aaPredicted RBP13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 TUFT1Q9NNX1 390 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 ANKEF1Q9NU02 776 aa13.36□□□□□ -0.27
AC007540.1-201ENST00000548473 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 K7ELQ4 463 aaPredicted RBP13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 DGKIO75912 1065 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 STAG3L1P0CL83 205 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 SARSP49591 514 aaKnown RBP13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 ERVK-21P61565 698 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 DSC3Q14574 896 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 EMC2Q15006 297 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 CCDC85BQ15834 202 aaPredicted RBP13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 NPAS4Q8IUM7 802 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 FIBCD1Q8N539 461 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 PSPC1Q8WXF1 523 aaKnown RBP13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 CCDC43Q96MW1 224 aaKnown RBP13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 POLR3CQ9BUI4 534 aaPredicted RBP13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 RGS18Q9NS28 235 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 LRWD1Q9UFC0 647 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 LRFN2Q9ULH4 789 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 PCDHB7Q9Y5E2 793 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 COL4A3BPQ9Y5P4 624 aa13.35□□□□□ -0.27
AC007540.1-201ENST00000548473 TTC3P53804 2025 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 XRCC6P12956 609 aaKnown RBP eCLIP13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 ZSCAN20P17040 1043 aaPredicted RBP13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 RPA1P27694 616 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 CCT6AP40227 531 aaKnown RBP13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 RARRES1P49788 294 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 GATMP50440 423 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 LAMTOR4Q0VGL1 99 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 GRB10Q13322 594 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 BTG3Q14201 252 aaPredicted RBP13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 IL17AQ16552 155 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 POTEGQ6S5H5 508 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 DTHD1Q6ZMT9 781 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 SLC24A5Q71RS6 500 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 ZNF410Q86VK4 478 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 CRIPAKQ8N1N5 446 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 MICALL1Q8N3F8 863 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 TCP11Q8WWU5 503 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 ZNF689Q96CS4 500 aaPredicted RBP13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 NACC1Q96RE7 527 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 MTRQ99707 1265 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 XPNPEP1Q9NQW7 623 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 C1orf112Q9NSG2 853 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 EYSQ5T1H1 3165 aa13.34□□□□□ -0.27
AC007540.1-201ENST00000548473 PP2D1A8MPX8 630 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 C9IYK1 514 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 LAD1O00515 517 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 GAS2O43903 313 aaKnown RBP13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 DGAT1O75907 488 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 PDCP20941 246 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 FAM189BP81408 668 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 PDIA5Q14554 519 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 ECM1Q16610 540 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 PAN2Q504Q3 1202 aaKnown RBP13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 EPC2Q52LR7 807 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 FAM43BQ6ZT52 329 aaPredicted RBP13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 MAEAQ7L5Y9 396 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 SLC17A8Q8NDX2 589 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 FBXO22Q8NEZ5 403 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 GDPD5Q8WTR4 605 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 SNX21Q969T3 373 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 INTS4Q96HW7 963 aaKnown RBP13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 RAB34Q9BZG1 259 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 INO80BQ9C086 356 aaPredicted RBP13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 RC3H2Q9HBD1 1191 aaKnown RBP13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 ATP6V0A4Q9HBG4 840 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 MTCH2Q9Y6C9 303 aa13.33□□□□□ -0.28
AC007540.1-201ENST00000548473 ASAP2O43150 1006 aa13.32□□□□□ -0.28
AC007540.1-201ENST00000548473 LPXNO60711 386 aa13.32□□□□□ -0.28
AC007540.1-201ENST00000548473 USO1O60763 962 aaKnown RBP13.32□□□□□ -0.28
AC007540.1-201ENST00000548473 SYT1P21579 422 aa13.32□□□□□ -0.28
AC007540.1-201ENST00000548473 SFPQP23246 707 aaKnown RBP eCLIP13.32□□□□□ -0.28
AC007540.1-201ENST00000548473 CDC25AP30304 524 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms