RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ZNF558Q96NG5 402 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 MAP7D2Q96T17 732 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 GLT8D2Q9H1C3 349 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 ELAC1Q9H777 363 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 C6orf50Q9HD87 102 aa13.53□□□□□ -0.24
TRAFD1-205ENST00000548277 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.24
TRAFD1-205ENST00000548277 MAGEB2O15479 319 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 TMOD1P28289 359 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 AVPR2P30518 371 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 PLCB3Q01970 1234 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 KCNC3Q14003 757 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 PTPN21Q16825 1174 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 Q6ZUG5 572 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 C12orf76Q8N812 135 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 NLRP7Q8WX94 980 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 AUTS2Q8WXX7 1259 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 ATOH1Q92858 354 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 PHKBQ93100 1093 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 ASIC4Q96FT7 647 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 SH2D3AQ9BRG2 576 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 ADAMTS10Q9H324 1103 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 NRBP2Q9NSY0 501 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 SPG21Q9NZD8 308 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 PIEZO1Q92508 2521 aa13.52□□□□□ -0.25
TRAFD1-205ENST00000548277 H0Y858 1186 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 ZNF862O60290 1169 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 CXCL14O95715 111 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 EIF4BP23588 611 aaKnown RBP13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 PKN1Q16512 942 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 UGCGQ16739 394 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 CLLU1OSQ5K130 101 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 SMAP1Q8IYB5 467 aaPredicted RBP13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 REXO1Q8N1G1 1221 aaKnown RBP13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 LRRC43Q8N309 656 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 KREMEN2Q8NCW0 462 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 CRYGNQ8WXF5 182 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 ZMYND12Q9H0C1 365 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 SMOC2Q9H3U7 446 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 POMKQ9H5K3 350 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 NGRNQ9NPE2 291 aaKnown RBP13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 DISC1Q9NRI5 854 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 CEP131Q9UPN4 1083 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 LZTS1Q9Y250 596 aa13.51□□□□□ -0.25
TRAFD1-205ENST00000548277 TMEM150BA6NC51 233 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 HOXA2O43364 376 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 CLASP2O75122 1294 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 OATP04181 439 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 GPC3P51654 580 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 BCAR1P56945 870 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 SETQ01105 290 aaPredicted RBP13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 AKAP17AQ02040 695 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 DRP2Q13474 957 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 SMC1AQ14683 1233 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 MTERF2Q49AM1 385 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 RARS2Q5T160 578 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 CES5AQ6NT32 575 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 TMEM184AQ6ZMB5 413 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 TMEM87AQ8NBN3 555 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 CASP10Q92851 521 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 BRF1Q92994 677 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 LPPQ93052 612 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 CCDC136Q96JN2 1154 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 RIPOR3Q96MK2 946 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 PRRX2Q99811 253 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 VPS54Q9P1Q0 977 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 HCFC2Q9Y5Z7 792 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 C2orf16Q68DN1 1984 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
TRAFD1-205ENST00000548277 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 FSD2A1L4K1 749 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 C2orf71A6NGG8 1288 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 WDR64B1ANS9 1081 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 C2CD4DB7Z1M9 353 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 MSH4O15457 936 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 PRPF3O43395 683 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 GFRA3O60609 400 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 ASGR2P07307 311 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 DARSP14868 501 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 GNA11P29992 359 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 ALDH7A1P49419 539 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 PRKCEQ02156 737 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 TBC1D8BQ0IIM8 1120 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 TPRNQ4KMQ1 711 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 CENPQQ7L2Z9 268 aaPredicted RBP13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 SLC39A11Q8N1S5 342 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 MRPL43Q8N983 215 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 FEZF2Q8TBJ5 459 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 CCDC12Q8WUD4 166 aaPredicted RBP13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 FAM167AQ96KS9 214 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 SLC26A6Q9BXS9 759 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 GBP3Q9H0R5 595 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 UNC45AQ9H3U1 944 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 INPP5FQ9Y2H2 1132 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 NR2E1Q9Y466 385 aa13.49□□□□□ -0.25
TRAFD1-205ENST00000548277 A0A087WZ62 844 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 A0A0U1RQF3 1178 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 EDIL3O43854 480 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 GAS7O60861 476 aa13.48□□□□□ -0.25
TRAFD1-205ENST00000548277 ZC3H11AO75152 810 aaKnown RBP eCLIP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms