RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 MAGEB10Q96LZ2 347 aaPredicted RBP3.47□□□□□ -1.85
CEP290-204ENST00000547926 SMURF1Q9HCE7 757 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 SRPK3Q9UPE1 567 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 CCDC163A0A0D9SF12 145 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.47□□□□□ -1.85
CEP290-204ENST00000547926 FAM90A27PA6NNH2 459 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 ZNF561-AS1K7EIQ3 104 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 KCNQ2O43526 872 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 EFCAB14O75071 495 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 ST5P78524 1137 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 HGFACQ04756 655 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 SEC23AQ15436 765 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 GPR19Q15760 415 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 TM4SF20Q53R12 229 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 RHOUQ7L0Q8 258 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 MRPL4Q9BYD3 311 aaKnown RBP3.47□□□□□ -1.85
CEP290-204ENST00000547926 TMEM260Q9NX78 707 aa3.47□□□□□ -1.85
CEP290-204ENST00000547926 TESQ9UGI8 421 aaKnown RBP3.47□□□□□ -1.85
CEP290-204ENST00000547926 PTPN1P18031 435 aaKnown RBP3.46□□□□□ -1.86
CEP290-204ENST00000547926 ETV4P43268 484 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 PTTG1IPP53801 180 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 THEMISQ8N1K5 641 aaPredicted RBP3.46□□□□□ -1.86
CEP290-204ENST00000547926 BEND2Q8NDZ0 799 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 ZDHHC5Q9C0B5 715 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 PDGFDQ9GZP0 370 aaPredicted RBP3.46□□□□□ -1.86
CEP290-204ENST00000547926 USP35Q9P2H5 1018 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 MRPL42Q9Y6G3 142 aaKnown RBP3.46□□□□□ -1.86
CEP290-204ENST00000547926 PLD2O14939 933 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 ASMTLO95671 621 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 NAT1P18440 290 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 IL13RA1P78552 427 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 HHEXQ03014 270 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 ZNF460Q14592 562 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 CRY1Q16526 586 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 TKFCQ3LXA3 575 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 FAM47CQ5HY64 1035 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 BTBD8Q5XKL5 378 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 USP30Q70CQ3 517 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 FILIP1Q7Z7B0 1213 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 JAZF1Q86VZ6 243 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 IGSF22Q8N9C0 903 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 CELF4Q9BZC1 486 aaKnown RBP3.46□□□□□ -1.86
CEP290-204ENST00000547926 RIC8BQ9NVN3 520 aa3.46□□□□□ -1.86
CEP290-204ENST00000547926 PROB1E7EW31 1015 aa3.45□□□□□ -1.86
CEP290-204ENST00000547926 DNAJC8O75937 253 aaPredicted RBP3.45□□□□□ -1.86
CEP290-204ENST00000547926 HMGCRP04035 888 aa3.45□□□□□ -1.86
CEP290-204ENST00000547926 SDSP20132 328 aa3.45□□□□□ -1.86
CEP290-204ENST00000547926 LACTBP83111 547 aaPredicted RBP3.45□□□□□ -1.86
CEP290-204ENST00000547926 C21orf62-AS1Q17RA5 79 aa3.45□□□□□ -1.86
CEP290-204ENST00000547926 OVCH1Q7RTY7 1134 aa3.45□□□□□ -1.86
CEP290-204ENST00000547926 NUB1Q9Y5A7 615 aa3.45□□□□□ -1.86
CEP290-204ENST00000547926 CD2APQ9Y5K6 639 aa3.45□□□□□ -1.86
CEP290-204ENST00000547926 ATP23Q9Y6H3 246 aa3.45□□□□□ -1.86
CEP290-204ENST00000547926 GSTA4O15217 222 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 ZFP36P26651 326 aaKnown RBP3.44□□□□□ -1.86
CEP290-204ENST00000547926 MRE11P49959 708 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 FIGNQ5HY92 759 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 NOSTRINQ8IVI9 506 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 NLGN4XQ8N0W4 816 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 SHCBP1Q8NEM2 672 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 HAS1Q92839 578 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 PGBD4Q96DM1 585 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 KRTAP1-5Q9BYS1 174 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 FANCLQ9NW38 375 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 RNF7Q9UBF6 113 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 TNPO3Q9Y5L0 923 aaKnown RBP3.44□□□□□ -1.86
CEP290-204ENST00000547926 COL4A3Q01955 1670 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 COL3A1P02461 1466 aaPredicted RBP3.44□□□□□ -1.86
CEP290-204ENST00000547926 PEX11BO96011 259 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 C4BPAP04003 597 aaKnown RBP3.44□□□□□ -1.86
CEP290-204ENST00000547926 DBPQ10586 325 aaPredicted RBP3.44□□□□□ -1.86
CEP290-204ENST00000547926 PABPC4Q13310 644 aaKnown RBP eCLIP3.44□□□□□ -1.86
CEP290-204ENST00000547926 FNDC3BQ53EP0 1204 aaKnown RBP3.44□□□□□ -1.86
CEP290-204ENST00000547926 TMEM177Q53S58 311 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 ADGRE4PQ86SQ3 457 aa3.44□□□□□ -1.86
CEP290-204ENST00000547926 POLR2AP24928 1970 aaKnown RBP3.44□□□□□ -1.86
CEP290-204ENST00000547926 SCDO00767 359 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 ZNF185O15231 689 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 CUTAO60888 179 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 GLRX3O76003 335 aaKnown RBP3.43□□□□□ -1.86
CEP290-204ENST00000547926 WDR72Q3MJ13 1102 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 ZCCHC8Q6NZY4 707 aaKnown RBP3.43□□□□□ -1.86
CEP290-204ENST00000547926 EP400NLQ6ZTU2 488 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 RD3Q7Z3Z2 195 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 C9orf106Q8NAJ2 232 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 SLC25A43Q8WUT9 341 aaPredicted RBP3.43□□□□□ -1.86
CEP290-204ENST00000547926 SAMD15Q9P1V8 674 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 FAM83GA6ND36 823 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 PRAMEF25A6NGN4 478 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 RASSF10A6NK89 507 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 M0R2C6 588 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 OPA1O60313 960 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 CLASP2O75122 1294 aaKnown RBP3.43□□□□□ -1.86
CEP290-204ENST00000547926 CDK4P11802 303 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 CD38P28907 300 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 MC4RP32245 332 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 IGFALSP35858 605 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 RIN1Q13671 783 aa3.43□□□□□ -1.86
CEP290-204ENST00000547926 BTBD7Q9P203 1132 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms