RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 C22orf31O95567 290 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 GJB1P08034 283 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 KLRC1P26715 233 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 IGBP1P78318 339 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 PTPN11Q06124 597 aaPredicted RBP17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 MAPK7Q13164 816 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 DMP1Q13316 513 aaPredicted RBP17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 ALCAMQ13740 583 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 MXD4Q14582 209 aaPredicted RBP17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 COBLL1Q53SF7 1204 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 NFRKBQ6P4R8 1299 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 MTHFD1LQ6UB35 978 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 MAEAQ7L5Y9 396 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 SESTD1Q86VW0 696 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 SFR1Q86XK3 245 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 FAM178BQ8IXR5 827 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 PSPC1Q8WXF1 523 aaKnown RBP17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 VTI1AQ96AJ9 217 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 OGDHLQ9ULD0 1010 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 PHF24Q9UPV7 400 aa17.51■□□□□ 0.39
TRAFD1-203ENST00000547063 RSPH10B2B2RC85 870 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 RPLP2P05387 115 aaKnown RBP17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 RSPH10BP0C881 870 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 CDC42EP1Q00587 391 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 NBPF20Q3BBV1 942 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 ISM2Q6H9L7 571 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 EFCAB12Q6NXP0 572 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 DAW1Q8N136 415 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 ZNF710Q8N1W2 664 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 METTL13Q8N6R0 699 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 LMBR1Q8WVP7 490 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 SPIRE2Q8WWL2 714 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 MAP7D2Q96T17 732 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 POLR3FQ9H1D9 316 aaPredicted RBP17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 MRPL44Q9H9J2 332 aaKnown RBP17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 SUGCTQ9HAC7 445 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 SETD4Q9NVD3 440 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 CEP350Q5VT06 3117 aa17.5■□□□□ 0.39
TRAFD1-203ENST00000547063 MBLAC1A4D2B0 266 aaPredicted RBP17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 SGPL1O95470 568 aa17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 MYCP01106 439 aaPredicted RBP17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 HOXC8P31273 242 aa17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 ARL2P36404 184 aa17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 TFDP1Q14186 410 aa17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 TRAPPC12Q8WVT3 735 aa17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 NTPCRQ9BSD7 190 aaKnown RBP17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 SLC39A2Q9NP94 309 aa17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 HDAC6Q9UBN7 1215 aa17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 PCDHB13Q9Y5F0 798 aa17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 PCDHA2Q9Y5H9 948 aa17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 PCNTO95613 3336 aa17.49■□□□□ 0.39
TRAFD1-203ENST00000547063 PHLPP2Q6ZVD8 1323 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 A0A0U1RQG5 324 aaPredicted RBP17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 SMIM35A0A1B0GVV1 85 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 SFI1A8K8P3 1242 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 PSMA7O14818 248 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 EIF3DO15371 548 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 TFRCP02786 760 aaKnown RBP17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 ERCC5P28715 1186 aaPredicted RBP17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 NAMPTP43490 491 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 STK4Q13043 487 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 ITGA7Q13683 1181 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 DPCR1Q3MIW9 517 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 ANO6Q4KMQ2 910 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 MARCH8Q5T0T0 291 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 TAF2Q6P1X5 1199 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 GUF1Q8N442 669 aaKnown RBP17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 U2AF1L4Q8WU68 220 aaKnown RBP17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 TMEM143Q96AN5 459 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 TMEM106CQ9BVX2 250 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 CRISPLD2Q9H0B8 497 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 ST6GALNAC4Q9H4F1 302 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 GPRC5CQ9NQ84 441 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 STARD7Q9NQZ5 370 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 SUCLA2Q9P2R7 463 aaPredicted RBP17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 GTF2IRD1Q9UHL9 959 aa17.48■□□□□ 0.39
TRAFD1-203ENST00000547063 UBE4BO95155 1302 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 A0A1W2PQ45 241 aaPredicted RBP17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 A0A1W2PQY0 241 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 CCDC169A6NNP5 214 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 GCNT3O95395 438 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 BMP6P22004 513 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 PEX3P56589 373 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 ADAM17P78536 824 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 POU5F1BQ06416 359 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 FAM47CQ5HY64 1035 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 ZNF720Q7Z2F6 126 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 MYOCDQ8IZQ8 938 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 LRRC71Q8N4P6 559 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 LINC01465Q8N7H1 131 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 ANKLE1Q8NAG6 615 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 PRPF31Q8WWY3 499 aaKnown RBP17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 HVCN1Q96D96 273 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 DHTKD1Q96HY7 919 aaPredicted RBP17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 KMT5AQ9NQR1 393 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 TBC1D7Q9P0N9 293 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 GDAQ9Y2T3 454 aa17.47■□□□□ 0.39
TRAFD1-203ENST00000547063 K7ENM7 598 aa17.46■□□□□ 0.39
TRAFD1-203ENST00000547063 CYP2C9P11712 490 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms