RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 POU5F1BQ06416 359 aa17.15■□□□□ 0.34
SSH1-204ENST00000546697 NCAPH2Q6IBW4 605 aa17.15■□□□□ 0.34
SSH1-204ENST00000546697 OTUD6AQ7L8S5 288 aa17.15■□□□□ 0.34
SSH1-204ENST00000546697 POLR3CQ9BUI4 534 aaPredicted RBP17.15■□□□□ 0.34
SSH1-204ENST00000546697 AKT3Q9Y243 479 aa17.15■□□□□ 0.34
SSH1-204ENST00000546697 MUC3AQ02505 3323 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 H3BNC9 293 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 LAD1O00515 517 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 MARCH6O60337 910 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 OR52Z1P0C646 297 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 FXR2P51116 673 aaKnown RBP eCLIP17.14■□□□□ 0.33
SSH1-204ENST00000546697 NPEPPSP55786 919 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 TMEM266Q2M3C6 531 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 EPC2Q52LR7 807 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 TTC38Q5R3I4 469 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 PLA2G4FQ68DD2 849 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 FAM117BQ6P1L5 589 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 IFNLR1Q8IU57 520 aaPredicted RBP17.14■□□□□ 0.33
SSH1-204ENST00000546697 ZNF579Q8NAF0 562 aaKnown RBP17.14■□□□□ 0.33
SSH1-204ENST00000546697 SLC7A3Q8WY07 619 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 RSPH1Q8WYR4 309 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 ADAM2Q99965 735 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 C17orf80Q9BSJ5 609 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 PLVAPQ9BX97 442 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 IFT122Q9HBG6 1241 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 TUFT1Q9NNX1 390 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 TMEM161AQ9NX61 479 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
SSH1-204ENST00000546697 RFXAPO00287 272 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 ASAP2O43150 1006 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 GTPBP6O43824 516 aaPredicted RBP17.13■□□□□ 0.33
SSH1-204ENST00000546697 UPP2O95045 317 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 RPA1P27694 616 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 MCM7P33993 719 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 PRPHP41219 470 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 TXKP42681 527 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 FOSBP53539 338 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 NFX1Q12986 1120 aaKnown RBP17.13■□□□□ 0.33
SSH1-204ENST00000546697 PDIA5Q14554 519 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 PCBP1Q15365 356 aaKnown RBP eCLIP17.13■□□□□ 0.33
SSH1-204ENST00000546697 NAALADL2Q58DX5 795 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 TRMT1LQ7Z2T5 733 aaKnown RBP17.13■□□□□ 0.33
SSH1-204ENST00000546697 TMEM192Q8IY95 271 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 FIBCD1Q8N539 461 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 IGSF22Q8N9C0 903 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 P2RX5Q93086 422 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 CEP170P1Q96L14 293 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 INO80BQ9C086 356 aaPredicted RBP17.13■□□□□ 0.33
SSH1-204ENST00000546697 XPNPEP1Q9NQW7 623 aa17.13■□□□□ 0.33
SSH1-204ENST00000546697 SUCLA2Q9P2R7 463 aaPredicted RBP17.13■□□□□ 0.33
SSH1-204ENST00000546697 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
SSH1-204ENST00000546697 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.13■□□□□ 0.33
SSH1-204ENST00000546697 A0A0U1RQF3 1178 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 POTEMA6NI47 508 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 DGAT1O75907 488 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 BMPR1AP36894 532 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 RARRES1P49788 294 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 CTTNQ14247 550 aaKnown RBP17.12■□□□□ 0.33
SSH1-204ENST00000546697 COL19A1Q14993 1142 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 ZNF598Q86UK7 904 aaKnown RBP17.12■□□□□ 0.33
SSH1-204ENST00000546697 FBXO22Q8NEZ5 403 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 ATXN2LQ8WWM7 1075 aaKnown RBP17.12■□□□□ 0.33
SSH1-204ENST00000546697 TCP11Q8WWU5 503 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 SH2D3AQ9BRG2 576 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 NFKBIZQ9BYH8 718 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 GCOM2Q9BZD3 368 aaPredicted RBP17.12■□□□□ 0.33
SSH1-204ENST00000546697 CERS4Q9HA82 394 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.12■□□□□ 0.33
SSH1-204ENST00000546697 DBR1Q9UK59 544 aaKnown RBP17.12■□□□□ 0.33
SSH1-204ENST00000546697 GINS2Q9Y248 185 aa17.12■□□□□ 0.33
SSH1-204ENST00000546697 FNDC1Q4ZHG4 1894 aaPredicted RBP17.12■□□□□ 0.33
SSH1-204ENST00000546697 ZBTB39O15060 712 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 IGFBP4P22692 258 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 GJB2P29033 226 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 CYP4A11Q02928 519 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 EMC2Q15006 297 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 RILPL1Q5EBL4 403 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 SRGAP1Q7Z6B7 1085 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 CATSPER3Q86XQ3 398 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 TPH2Q8IWU9 490 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 GDPD5Q8WTR4 605 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 PSPC1Q8WXF1 523 aaKnown RBP17.11■□□□□ 0.33
SSH1-204ENST00000546697 LMAN2LQ9H0V9 348 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 COL4A3BPQ9Y5P4 624 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
SSH1-204ENST00000546697 A0A087WZ62 844 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 DENND3A2RUS2 1198 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 ZNF623O75123 536 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 EOMESO95936 686 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 ARL2P36404 184 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 POLGP54098 1239 aaPredicted RBP17.1■□□□□ 0.33
SSH1-204ENST00000546697 BTG3Q14201 252 aaPredicted RBP17.1■□□□□ 0.33
SSH1-204ENST00000546697 MXD4Q14582 209 aaPredicted RBP17.1■□□□□ 0.33
SSH1-204ENST00000546697 ZNF174Q15697 407 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 FERMT3Q86UX7 667 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 PRPF31Q8WWY3 499 aaKnown RBP17.1■□□□□ 0.33
SSH1-204ENST00000546697 NLRP7Q8WX94 980 aa17.1■□□□□ 0.33
SSH1-204ENST00000546697 MRPL38Q96DV4 380 aaKnown RBP17.1■□□□□ 0.33
SSH1-204ENST00000546697 FDXACB1Q9BRP7 624 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms