RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PPP1R18Q6NYC8 613 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 TAOK1Q7L7X3 1001 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 AGAP11Q8TF27 550 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 UIMC1Q96RL1 719 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 MTFR1LQ9H019 292 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 SLC24A3Q9HC58 644 aa15.38■□□□□ 0.05
SRP54-202ENST00000546080 METTL14Q9HCE5 456 aaKnown RBP15.38■□□□□ 0.05
SRP54-202ENST00000546080 MTRF1LQ9UGC7 380 aaKnown RBP15.38■□□□□ 0.05
SRP54-202ENST00000546080 DDX60LQ5H9U9 1706 aaKnown RBP15.37■□□□□ 0.05
SRP54-202ENST00000546080 RPTORQ8N122 1335 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 PPP1R12AO14974 1030 aaPredicted RBP15.37■□□□□ 0.05
SRP54-202ENST00000546080 EVI5O60447 810 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 AKAP3O75969 853 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 UBOX5O94941 541 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 LDHCP07864 332 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 ABCB4P21439 1286 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 PDE6CP51160 858 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 DRG2P55039 364 aaKnown RBP15.37■□□□□ 0.05
SRP54-202ENST00000546080 ZNF211Q13398 564 aaPredicted RBP15.37■□□□□ 0.05
SRP54-202ENST00000546080 PLS1Q14651 629 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 SLMAPQ14BN4 828 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 ARSHQ5FYA8 562 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 UHMK1Q8TAS1 419 aaKnown RBP15.37■□□□□ 0.05
SRP54-202ENST00000546080 DHX36Q9H2U1 1008 aaKnown RBP15.37■□□□□ 0.05
SRP54-202ENST00000546080 CNOT7Q9UIV1 285 aaKnown RBP15.37■□□□□ 0.05
SRP54-202ENST00000546080 CD2APQ9Y5K6 639 aa15.37■□□□□ 0.05
SRP54-202ENST00000546080 SNX3O60493 162 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 CLK2P49760 499 aaKnown RBP15.36■□□□□ 0.05
SRP54-202ENST00000546080 SLC12A3P55017 1021 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 NCALDP61601 193 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 PPATQ06203 517 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 GLYCTKQ8IVS8 523 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 SLC30A5Q8TAD4 765 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 EPS8L3Q8TE67 593 aaKnown RBP15.36■□□□□ 0.05
SRP54-202ENST00000546080 DYDC1Q8WWB3 177 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 L3MBTL3Q96JM7 780 aaPredicted RBP15.36■□□□□ 0.05
SRP54-202ENST00000546080 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 ECT2Q9H8V3 914 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 GPCPD1Q9NPB8 672 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 PARP2Q9UGN5 583 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 IGSF9BQ9UPX0 1349 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 PDXKO00764 312 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 RARAP10276 462 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 ALADP13716 330 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 GBP1P32455 592 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 SLCO1A2P46721 670 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 ALDH5A1P51649 535 aaPredicted RBP15.36■□□□□ 0.05
SRP54-202ENST00000546080 KCNJ2P63252 427 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 CNGA2Q16280 664 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 GRIK5Q16478 980 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 BTNL9Q6UXG8 535 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 SFR1Q86XK3 245 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 ACSBG1Q96GR2 724 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 NAP1L4Q99733 375 aaKnown RBP15.36■□□□□ 0.05
SRP54-202ENST00000546080 SEMA4AQ9H3S1 761 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.36■□□□□ 0.05
SRP54-202ENST00000546080 GRHL1Q9NZI5 618 aa15.36■□□□□ 0.05
SRP54-202ENST00000546080 MYH14Q7Z406 1995 aaKnown RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 POTEFA5A3E0 1075 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 RASGRF2O14827 1237 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 SLC16A3O15427 465 aaKnown RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 SLC26A4O43511 780 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 PHF2O75151 1096 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 NR3C1P04150 777 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 FGFR4P22455 802 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 RPL13P26373 211 aaKnown RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 ZNF131P52739 623 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 ZKSCAN8Q15776 578 aaPredicted RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 POTEGQ6S5H5 508 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 POTEEQ6S8J3 1075 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 LRRC47Q8N1G4 583 aaKnown RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 SLC35C1Q96A29 364 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 C18orf8Q96DM3 657 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 NLRP3Q96P20 1036 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 TMEM109Q9BVC6 243 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 KCNMB3Q9NPA1 279 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 GGT7Q9UJ14 662 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 USP15Q9Y4E8 981 aaPredicted RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 PNMA6FA0A0J9YX94 578 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 MED24O75448 989 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 SKAP2O75563 359 aaPredicted RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 SOX5P35711 763 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 BTDP43251 543 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 GIT2Q14161 759 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 SLC10A5Q5PT55 438 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 DHX37Q8IY37 1157 aaKnown RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 GBP7Q8N8V2 638 aaPredicted RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 RTFDC1Q9BY42 306 aaPredicted RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 TYW1Q9NV66 732 aaKnown RBP15.35■□□□□ 0.05
SRP54-202ENST00000546080 NHSQ6T4R5 1651 aa15.35■□□□□ 0.05
SRP54-202ENST00000546080 SYNGAP1Q96PV0 1343 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 GTPBP10A4D1E9 387 aaKnown RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 IGF2BP3O00425 579 aaKnown RBP eCLIP15.34■□□□□ 0.05
SRP54-202ENST00000546080 SUN1O94901 812 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 OAS1P00973 400 aaKnown RBP15.34■□□□□ 0.05
SRP54-202ENST00000546080 CHRNA3P32297 505 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 RFC4P35249 363 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 HOXD13P35453 343 aa15.34■□□□□ 0.05
SRP54-202ENST00000546080 STAT3P40763 770 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms