RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SYNPOQ8N3V7 929 aa6.99□□□□□ -1.29
SNHG1-224ENST00000545688 EXTL1Q92935 676 aa6.99□□□□□ -1.29
SNHG1-224ENST00000545688 TMEM176AQ96HP8 235 aa6.99□□□□□ -1.29
SNHG1-224ENST00000545688 INTS7Q9NVH2 962 aaKnown RBP6.99□□□□□ -1.29
SNHG1-224ENST00000545688 H2AFY2Q9P0M6 372 aaPredicted RBP6.99□□□□□ -1.29
SNHG1-224ENST00000545688 DENND2AQ9ULE3 1009 aa6.99□□□□□ -1.29
SNHG1-224ENST00000545688 PMS2P1A4D2B8 440 aa6.98□□□□□ -1.29
SNHG1-224ENST00000545688 GDF5P43026 501 aa6.98□□□□□ -1.29
SNHG1-224ENST00000545688 SESN2P58004 480 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-224ENST00000545688 GRM7Q14831 915 aa6.98□□□□□ -1.29
SNHG1-224ENST00000545688 TKFCQ3LXA3 575 aa6.98□□□□□ -1.29
SNHG1-224ENST00000545688 HOMER1Q86YM7 354 aa6.98□□□□□ -1.29
SNHG1-224ENST00000545688 NKD2Q969F2 451 aaPredicted RBP6.98□□□□□ -1.29
SNHG1-224ENST00000545688 TLR9Q9NR96 1032 aa6.98□□□□□ -1.29
SNHG1-224ENST00000545688 OXSMQ9NWU1 459 aa6.98□□□□□ -1.29
SNHG1-224ENST00000545688 KCMF1Q9P0J7 381 aa6.98□□□□□ -1.29
SNHG1-224ENST00000545688 C2orf78A6NCI8 922 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 FAM83GA6ND36 823 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 PLSCR1O15162 318 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 KPNA6O60684 536 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 FZD7O75084 574 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 H2AFYO75367 372 aaKnown RBP6.97□□□□□ -1.29
SNHG1-224ENST00000545688 ATP2A2P16615 1042 aaKnown RBP6.97□□□□□ -1.29
SNHG1-224ENST00000545688 ACVRL1P37023 503 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 ADCY7P51828 1080 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 FOXE3Q13461 319 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 NME9Q86XW9 330 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 D2HGDHQ8N465 521 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 RABGGTAQ92696 567 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 LPPQ93052 612 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 GFM2Q969S9 779 aaKnown RBP6.97□□□□□ -1.29
SNHG1-224ENST00000545688 SLC7A6OSQ96CW6 309 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-224ENST00000545688 ORAI3Q9BRQ5 295 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 ZNF341Q9BYN7 854 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 FANCLQ9NW38 375 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 SPO11Q9Y5K1 396 aa6.97□□□□□ -1.29
SNHG1-224ENST00000545688 RBM8AQ9Y5S9 174 aaKnown RBP6.97□□□□□ -1.29
SNHG1-224ENST00000545688 MIIPQ5JXC2 388 aa6.96□□□□□ -1.3
SNHG1-224ENST00000545688 C16orf86Q6ZW13 317 aa6.96□□□□□ -1.3
SNHG1-224ENST00000545688 ZFPM1Q8IX07 1006 aa6.96□□□□□ -1.3
SNHG1-224ENST00000545688 NXPE1Q8N323 547 aa6.96□□□□□ -1.3
SNHG1-224ENST00000545688 GCDHQ92947 438 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-224ENST00000545688 ZNF503Q96F45 646 aa6.96□□□□□ -1.3
SNHG1-224ENST00000545688 DYDC2Q96IM9 177 aa6.96□□□□□ -1.3
SNHG1-224ENST00000545688 RPL10LQ96L21 214 aaKnown RBP6.96□□□□□ -1.3
SNHG1-224ENST00000545688 SLC6A15Q9H2J7 730 aa6.96□□□□□ -1.3
SNHG1-224ENST00000545688 TOMM22Q9NS69 142 aa6.96□□□□□ -1.3
SNHG1-224ENST00000545688 POLR3BQ9NW08 1133 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-224ENST00000545688 ZKSCAN5Q9Y2L8 839 aa6.96□□□□□ -1.3
SNHG1-224ENST00000545688 HS3ST3A1Q9Y663 406 aa6.96□□□□□ -1.3
SNHG1-224ENST00000545688 A0A1W2PRX2 142 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 ZNF891A8MT65 544 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-224ENST00000545688 SLPIP03973 132 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 ACRV1P26436 265 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 HIBADHP31937 336 aaKnown RBP6.95□□□□□ -1.3
SNHG1-224ENST00000545688 NEK4P51957 841 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 ADAM8P78325 824 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 ADCY1Q08828 1119 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 TCIRG1Q13488 830 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 BMP8AQ7Z5Y6 402 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 ADGRE4PQ86SQ3 457 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 C1orf210Q8IVY1 113 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 C7orf31Q8N865 590 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 IL17DQ8TAD2 202 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 RTF1Q92541 710 aaKnown RBP6.95□□□□□ -1.3
SNHG1-224ENST00000545688 APPBP2Q92624 585 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 RPGRQ92834 1020 aaKnown RBP6.95□□□□□ -1.3
SNHG1-224ENST00000545688 SORCS2Q96PQ0 1159 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 GPHA2Q96T91 129 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 HAPLN2Q9GZV7 340 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 MTFR1LQ9H019 292 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 DNAI1Q9UI46 699 aa6.95□□□□□ -1.3
SNHG1-224ENST00000545688 CAPN14A8MX76 684 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 NPIPB8E9PQR5 432 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 GAS7O60861 476 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 APOL3O95236 402 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 F2P00734 622 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 BCAR1P56945 870 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 BPIFB4P59827 614 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 DGCR2P98153 550 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 DSG1Q02413 1049 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 HHEXQ03014 270 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 CNNM4Q6P4Q7 775 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 LRRTM3Q86VH5 581 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 SGMS1Q86VZ5 419 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 KIF18BQ86Y91 864 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 PHYKPLQ8IUZ5 450 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 ANKRD53Q8N9V6 530 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 CHTF18Q8WVB6 975 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 NINJ1Q92982 152 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 WDR92Q96MX6 357 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 MYL10Q9BUA6 226 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 POFUT1Q9H488 388 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 ZMAT4Q9H898 229 aa6.94□□□□□ -1.3
SNHG1-224ENST00000545688 HECAQ9UBI9 543 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-224ENST00000545688 CYR61O00622 381 aa6.93□□□□□ -1.3
SNHG1-224ENST00000545688 PRPF6O94906 941 aaKnown RBP6.93□□□□□ -1.3
SNHG1-224ENST00000545688 C1SP09871 688 aa6.93□□□□□ -1.3
SNHG1-224ENST00000545688 POU3F2P20265 443 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-224ENST00000545688 PTH1RQ03431 593 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 611.2 ms