RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 SLITRK6Q9H5Y7 841 aa25.33■■□□□ 1.64
FOXA1-202ENST00000545425 EPB41L5Q9HCM4 733 aa25.33■■□□□ 1.64
FOXA1-202ENST00000545425 PCDHB13Q9Y5F0 798 aa25.33■■□□□ 1.64
FOXA1-202ENST00000545425 MYO1CO00159 1063 aa25.32■■□□□ 1.64
FOXA1-202ENST00000545425 ITGBL1O95965 494 aaPredicted RBP25.32■■□□□ 1.64
FOXA1-202ENST00000545425 GH2P01242 217 aa25.32■■□□□ 1.64
FOXA1-202ENST00000545425 DNAJC21Q5F1R6 531 aaKnown RBP25.32■■□□□ 1.64
FOXA1-202ENST00000545425 LRCH2Q5VUJ6 765 aa25.32■■□□□ 1.64
FOXA1-202ENST00000545425 RASGEF1CQ8N431 466 aa25.32■■□□□ 1.64
FOXA1-202ENST00000545425 TPCN2Q8NHX9 752 aa25.32■■□□□ 1.64
FOXA1-202ENST00000545425 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.32■■□□□ 1.64
FOXA1-202ENST00000545425 TMX2Q9Y320 296 aa25.32■■□□□ 1.64
FOXA1-202ENST00000545425 NCANO14594 1321 aa25.32■■□□□ 1.64
FOXA1-202ENST00000545425 BHMG1C9JSJ3 638 aaPredicted RBP25.31■■□□□ 1.64
FOXA1-202ENST00000545425 TGFB1I1O43294 461 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 GLI1P08151 1106 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 MAPTP10636 758 aaKnown RBP25.31■■□□□ 1.64
FOXA1-202ENST00000545425 GUCY2CP25092 1073 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 HSPA9P38646 679 aaKnown RBP25.31■■□□□ 1.64
FOXA1-202ENST00000545425 IRX5P78411 483 aaPredicted RBP25.31■■□□□ 1.64
FOXA1-202ENST00000545425 GUCY2DQ02846 1103 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 TCERG1LQ5VWI1 586 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 MAP1SQ66K74 1059 aaPredicted RBP25.31■■□□□ 1.64
FOXA1-202ENST00000545425 MICALL2Q8IY33 904 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 DNAJC5GQ8N7S2 189 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 LRRC45Q96CN5 670 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 GDAP1L1Q96MZ0 367 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 KRT12Q99456 494 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 DMAC2Q9NW81 257 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 FRMD4BQ9Y2L6 1034 aa25.31■■□□□ 1.64
FOXA1-202ENST00000545425 TULP1O00294 542 aaPredicted RBP25.3■■□□□ 1.64
FOXA1-202ENST00000545425 ACTN1P12814 892 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 NOP2P46087 812 aaKnown RBP25.3■■□□□ 1.64
FOXA1-202ENST00000545425 RIN2Q8WYP3 895 aaPredicted RBP25.3■■□□□ 1.64
FOXA1-202ENST00000545425 PACSIN1Q9BY11 444 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 RASSF4Q9H2L5 321 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 RANBP17Q9H2T7 1088 aaKnown RBP25.3■■□□□ 1.64
FOXA1-202ENST00000545425 PASKQ96RG2 1323 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 FAM196BA6NMK8 535 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 KCNK3O14649 394 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 ZEB2O60315 1214 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 SLITRK3O94933 977 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 GDF11O95390 407 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 SOX5P35711 763 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 IRAK1P51617 712 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 MYCT1Q8N699 235 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 ZC3H15Q8WU90 426 aaKnown RBP25.3■■□□□ 1.64
FOXA1-202ENST00000545425 EHD2Q9NZN4 543 aa25.3■■□□□ 1.64
FOXA1-202ENST00000545425 EML1O00423 815 aa25.29■■□□□ 1.64
FOXA1-202ENST00000545425 EIF3HO15372 352 aaKnown RBP eCLIP25.29■■□□□ 1.64
FOXA1-202ENST00000545425 TMEM253P0C7T8 217 aa25.29■■□□□ 1.64
FOXA1-202ENST00000545425 CACNB3P54284 484 aa25.29■■□□□ 1.64
FOXA1-202ENST00000545425 HTRA3P83110 453 aa25.29■■□□□ 1.64
FOXA1-202ENST00000545425 PEX26Q7Z412 305 aa25.29■■□□□ 1.64
FOXA1-202ENST00000545425 SPATS2Q86XZ4 545 aaKnown RBP25.29■■□□□ 1.64
FOXA1-202ENST00000545425 TSEN2Q8NCE0 465 aaKnown RBP25.29■■□□□ 1.64
FOXA1-202ENST00000545425 AGBL3Q8NEM8 1001 aa25.29■■□□□ 1.64
FOXA1-202ENST00000545425 NAP1L3Q99457 506 aaPredicted RBP25.29■■□□□ 1.64
FOXA1-202ENST00000545425 RIT2Q99578 217 aa25.29■■□□□ 1.64
FOXA1-202ENST00000545425 SMARCAL1Q9NZC9 954 aa25.29■■□□□ 1.64
FOXA1-202ENST00000545425 STXBP5LQ9Y2K9 1186 aa25.29■■□□□ 1.64
FOXA1-202ENST00000545425 ZMYM2Q9UBW7 1377 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 HMGB1P1B2RPK0 211 aaPredicted RBP25.28■■□□□ 1.64
FOXA1-202ENST00000545425 P4HA2O15460 535 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 GAS7O60861 476 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 CARSP49589 748 aaKnown RBP25.28■■□□□ 1.64
FOXA1-202ENST00000545425 SNRPFP62306 86 aaKnown RBP25.28■■□□□ 1.64
FOXA1-202ENST00000545425 CYP4A11Q02928 519 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 MTMR3Q13615 1198 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 RSBN1LQ6PCB5 846 aaPredicted RBP25.28■■□□□ 1.64
FOXA1-202ENST00000545425 ZNF720Q7Z2F6 126 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 MAATS1Q7Z4T9 603 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 CCDC26Q8TAB7 109 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 SLC30A5Q8TAD4 765 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 ZIM3Q96PE6 472 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 CREBZFQ9NS37 354 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 FEZ2Q9UHY8 353 aaPredicted RBP25.28■■□□□ 1.64
FOXA1-202ENST00000545425 NFU1Q9UMS0 254 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 SCN9AQ15858 1988 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 RSPH10B2B2RC85 870 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 RSPH10BP0C881 870 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 FMO5P49326 533 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 CEP55Q53EZ4 464 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 SPDYCQ5MJ68 293 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 KDM7AQ6ZMT4 941 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 NIPA1Q7RTP0 329 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 CASKIN2Q8WXE0 1202 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 CSRNP1Q96S65 589 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 PGAP2Q9UHJ9 254 aa25.28■■□□□ 1.64
FOXA1-202ENST00000545425 BCRP11274 1271 aa25.27■■□□□ 1.64
FOXA1-202ENST00000545425 FAM178BQ8IXR5 827 aa25.27■■□□□ 1.64
FOXA1-202ENST00000545425 RFFLQ8WZ73 363 aa25.27■■□□□ 1.64
FOXA1-202ENST00000545425 DYDC2Q96IM9 177 aa25.27■■□□□ 1.64
FOXA1-202ENST00000545425 TEKT3Q9BXF9 490 aa25.27■■□□□ 1.64
FOXA1-202ENST00000545425 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.27■■□□□ 1.64
FOXA1-202ENST00000545425 PSME4Q14997 1843 aa25.27■■□□□ 1.64
FOXA1-202ENST00000545425 ATXN2Q99700 1313 aaKnown RBP25.26■■□□□ 1.63
FOXA1-202ENST00000545425 F8VZ95 297 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 ZBTB48P10074 688 aaPredicted RBP25.26■■□□□ 1.63
FOXA1-202ENST00000545425 HOXA13P31271 388 aaPredicted RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms