RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PTGDRQ13258 359 aa17.55■□□□□ 0.4
CCDC78-216ENST00000544996 SLC24A5Q71RS6 500 aa17.55■□□□□ 0.4
CCDC78-216ENST00000544996 FIBCD1Q8N539 461 aa17.55■□□□□ 0.4
CCDC78-216ENST00000544996 ZNF579Q8NAF0 562 aaKnown RBP17.55■□□□□ 0.4
CCDC78-216ENST00000544996 PSPC1Q8WXF1 523 aaKnown RBP17.55■□□□□ 0.4
CCDC78-216ENST00000544996 SAMD11Q96NU1 681 aa17.55■□□□□ 0.4
CCDC78-216ENST00000544996 INO80BQ9C086 356 aaPredicted RBP17.55■□□□□ 0.4
CCDC78-216ENST00000544996 RGS18Q9NS28 235 aa17.55■□□□□ 0.4
CCDC78-216ENST00000544996 MTUS1Q9ULD2 1270 aa17.55■□□□□ 0.4
CCDC78-216ENST00000544996 PCDHB7Q9Y5E2 793 aa17.55■□□□□ 0.4
CCDC78-216ENST00000544996 PCDHB6Q9Y5E3 794 aa17.55■□□□□ 0.4
CCDC78-216ENST00000544996 GBF1Q92538 1859 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 MICAL3Q7RTP6 2002 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 IBSPP21815 317 aaPredicted RBP17.54■□□□□ 0.4
CCDC78-216ENST00000544996 SARSP49591 514 aaKnown RBP17.54■□□□□ 0.4
CCDC78-216ENST00000544996 FXR2P51116 673 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCDC78-216ENST00000544996 ADGRE1Q14246 886 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 EMC2Q15006 297 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 HAUS3Q68CZ6 603 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 CATSPER3Q86XQ3 398 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 C4orf32Q8N8J7 132 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 NLRP4Q96MN2 994 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 NACC1Q96RE7 527 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 MTRQ99707 1265 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 POLR3CQ9BUI4 534 aaPredicted RBP17.54■□□□□ 0.4
CCDC78-216ENST00000544996 COL4A3BPQ9Y5P4 624 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 STK24Q9Y6E0 443 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 SIP14410 1827 aa17.54■□□□□ 0.4
CCDC78-216ENST00000544996 A0A087WZ62 844 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 K7ELQ4 463 aaPredicted RBP17.53■□□□□ 0.4
CCDC78-216ENST00000544996 RFXAPO00287 272 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 ASAP2O43150 1006 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 DGAT1O75907 488 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 DGKIO75912 1065 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 SPATA31C1P0DKV0 1188 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 SFPQP23246 707 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCDC78-216ENST00000544996 RPA1P27694 616 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 BTG3Q14201 252 aaPredicted RBP17.53■□□□□ 0.4
CCDC78-216ENST00000544996 PDIA5Q14554 519 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 SLC17A8Q8NDX2 589 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 PIGOQ8TEQ8 1089 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 PRPF31Q8WWY3 499 aaKnown RBP17.53■□□□□ 0.4
CCDC78-216ENST00000544996 TMEM143Q96AN5 459 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 INTS4Q96HW7 963 aaKnown RBP17.53■□□□□ 0.4
CCDC78-216ENST00000544996 FDXACB1Q9BRP7 624 aaPredicted RBP17.53■□□□□ 0.4
CCDC78-216ENST00000544996 BMP2KQ9NSY1 1161 aaPredicted RBP17.53■□□□□ 0.4
CCDC78-216ENST00000544996 LRWD1Q9UFC0 647 aa17.53■□□□□ 0.4
CCDC78-216ENST00000544996 ADGRA3Q8IWK6 1321 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 EPOPA6NHQ4 379 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 MGEA5O60502 916 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 MED24O75448 989 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 MUTP22033 750 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 PRPHP41219 470 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 RARRES1P49788 294 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 DTHD1Q6ZMT9 781 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 SPRED2Q7Z698 418 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 KSR1Q8IVT5 923 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 CRIPAKQ8N1N5 446 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 FBXO22Q8NEZ5 403 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 C17orf80Q9BSJ5 609 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 ATP6V0A4Q9HBG4 840 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.52■□□□□ 0.4
CCDC78-216ENST00000544996 DACT1Q9NYF0 836 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 RWDD3Q9Y3V2 267 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 PTPRSQ13332 1948 aa17.52■□□□□ 0.4
CCDC78-216ENST00000544996 VPS37CA5D8V6 355 aaPredicted RBP17.51■□□□□ 0.39
CCDC78-216ENST00000544996 C9IYK1 514 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 CSDE1O75534 798 aaKnown RBP17.51■□□□□ 0.39
CCDC78-216ENST00000544996 SRGAP2CP0DJJ0 459 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 POU3F3P20264 500 aaPredicted RBP17.51■□□□□ 0.39
CCDC78-216ENST00000544996 CCT6AP40227 531 aaKnown RBP17.51■□□□□ 0.39
CCDC78-216ENST00000544996 LAMTOR4Q0VGL1 99 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 GRB10Q13322 594 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 DSC3Q14574 896 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 MXD4Q14582 209 aaPredicted RBP17.51■□□□□ 0.39
CCDC78-216ENST00000544996 EPC2Q52LR7 807 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 BRAPQ7Z569 592 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 FERMT3Q86UX7 667 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 TMEM192Q8IY95 271 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 PPM1EQ8WY54 764 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 ZNF689Q96CS4 500 aaPredicted RBP17.51■□□□□ 0.39
CCDC78-216ENST00000544996 RC3H2Q9HBD1 1191 aaKnown RBP17.51■□□□□ 0.39
CCDC78-216ENST00000544996 CHST12Q9NRB3 414 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 DBR1Q9UK59 544 aaKnown RBP17.51■□□□□ 0.39
CCDC78-216ENST00000544996 WDR81Q562E7 1941 aa17.51■□□□□ 0.39
CCDC78-216ENST00000544996 CHD9Q3L8U1 2897 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 EVPLQ92817 2033 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 CDH23Q9H251 3354 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 A0A087WWV3 80 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 FGFR4P22455 802 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 FAM189BP81408 668 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 TFDP1Q14186 410 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 CCDC85BQ15834 202 aaPredicted RBP17.5■□□□□ 0.39
CCDC78-216ENST00000544996 KRT79Q5XKE5 535 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 POTEGQ6S5H5 508 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 CATSPER4Q7RTX7 472 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 SRGAP1Q7Z6B7 1085 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 CMTR2Q8IYT2 770 aaKnown RBP17.5■□□□□ 0.39
CCDC78-216ENST00000544996 MICALL1Q8N3F8 863 aa17.5■□□□□ 0.39
CCDC78-216ENST00000544996 IGSF22Q8N9C0 903 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms